Danio rerio (zebrafish): 378453
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Entry
378453 CDS
T01004
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
378453 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
378453 (hnrnpa1b)
03041 Spliceosome [BR:
dre03041
]
378453 (hnrnpa1b)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
378453 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
378453 (hnrnpa1b)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
hnRNP proteins
378453 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
378453
NCBI-ProteinID:
NP_956398
ZFIN:
ZDB-GENE-030912-14
Ensembl:
ENSDARG00000036675
UniProt:
A0A8M1PGI6
Q803K3
LinkDB
All DBs
Position
23:36306542..36310418
Genome browser
AA seq
403 aa
AA seq
DB search
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFV
TYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKDDTEENH
LRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMANTGRGGGGGGGGGGGNFNRYGNNGGYNNDFGGGGGGGNRDGYFGRGGRGNNFG
GGGGGGGYGGGGDCYNNNNGFGGGGYGGGGGNGGGSPGNYGGNRGYGGGGGGGHGYGNQG
GGYGGGNSGGGGGGYNNYNNGNGNFGGGNFGGGGGGGGNSGGGGNYNDFGNYNSQQSNYG
PMKGNFGGGGRNSGPYGGGYGGGSSGSGGGGSGYGGGSGGRRF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagggccagccacgtgagccagagcagctgcggaagctcttcattggaggg
ctcagctttgagaccacagacgatagtttaagggcacactttgaacaatggggcacctta
acagattgtgtggtgatgaaagatccaaacacaaagcgctccaggggctttgggtttgtt
acttactccagtgtggatgaagtcaatgcctctatggatgcacgtcctcacaaggtcgat
ggtagacttgtagagcccaaacgagccgtgtctagagaggattccagcaaaccatttgct
cacacaactgtgaagaagattttcgtgggaggcatcaaggatgatacagaggagaaccat
ctacgcgactacttcgatcagtttggaaagattgaggttgttgagataatggttgaccac
aagaccggaaataaaagaggctttgccttcgtcacatttgatgaccatgactctgttgac
cgtatcgtcattcaaaagtaccacactgtgaatggacacaactgtgaagtccgaaaagct
ctttcaaaacaagaaatggcaaacactggtcgtggtggtggtggtggaggcggcggcggt
ggaggaaacttcaaccgatatggcaataatggtggctacaataatgactttggaggtggc
ggtggaggtggcaaccgtgatggatattttggaagaggaggaagaggaaataactttgga
ggtggtggtggcggcggtggctatggaggaggcggtgactgctacaacaacaacaatgga
tttggaggaggtggctacggcggtggtggcggcaatggtggtggcagtcctggcaactat
ggaggcaaccgtggatatggaggaggcggtggaggaggacatggttatggcaaccaggga
ggaggctatggtggtggcaacagtggtggcggtggtggtggctataataactacaacaat
ggcaatggaaactttggaggtggtaactttggaggtggtggtggtggtggcggcaacagt
ggaggaggtggaaactacaatgacttcggcaactataatagccagcagtccaactatggt
cccatgaaagggaactttggaggcggtggaagaaacagtggcccatatggtggtggctat
ggaggtggatctagtggtagtggaggaggcggcagtggttatggaggtggctctggcggt
agacggttttaa
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