KEGG   Danio rerio (zebrafish): 378454
Entry
378454            CDS       T01004                                 
Symbol
aaaS
Name
(RefSeq) aladin
  KO
K14320  aladin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    378454 (aaaS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    378454 (aaaS)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     378454 (aaaS)
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st ANAPC4_WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_IFT140_1st WD40_Prp19 Beta-prop_WDR19_1st eIF2A Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 378454
NCBI-ProteinID: NP_998390
ZFIN: ZDB-GENE-030912-4
Ensembl: ENSDARG00000102274
UniProt: Q6NW98
LinkDB
Position
9:complement(162303..206789)
AA seq 499 aa
MCSLAVFPPPLAAGHTHTLMEQHNELQASDPQVDLPSPQFTRDTLKGHSRAESSSKSAFL
DQRDTLWRRSAGAWRDAGLYGLLDQITNSADEVPRCVSVGSSCLLALLRWSSSFHGSLFP
HLTLSSDEMVAEFSQMLDWSDSAVRSFSWHPHTDKFAVALLDDSIKIYKPHSSTAPTLKH
RCQRSVCALQWKPLCGSALAVACQSCLLIWHVDPASLSTRPSSGCAQVLSHPGHSPITSI
AWSPTGSLLVSASPVDTAMMVWDVAAESCVPLRRVGGGGVTFLSWSPDGSRLLAATPSAL
FRVWETRMWTCERWPCLKGSCQSACWSPDGACLLLSIQGERLIYALSFSDLTGGPKAATV
VADLSETSFPGPEGDLTVGGEVCSLSWDPRGERLAVLLKGDAQSTDHPSVIAVFKTRCSP
AFELLPCGFVMGEAGAEPRFMQFHPHFQHGALLTVCWSDGRITHVPFYFSSAGLSDSQRP
AALSTADRSISRLYTEDLH
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtgttctctggctgtgtttcctcctccgctggctgcgggacacacacacacactgatg
gagcagcacaacgagctgcaggcgtctgaccctcaggtcgatctgcccagtcctcagttc
accagagacacactgaagggtcacagtcgagccgagagcagcagtaaatcagcattcctg
gaccagagagacacactgtggaggagaagcgctggagcctggcgtgatgctggtctgtac
ggccttctggaccagatcaccaacagtgcagatgaagtgcccaggtgtgtgtcggtgggc
tcctcctgtctgctggctctgctgagatggtcttcctccttccatggctctctgtttcct
catctgacactcagcagtgatgagatggtggccgagttctcccagatgttggactggtca
gacagtgctgtgcggagcttctcttggcatcctcacacggataagtttgctgtagcgctg
ctggacgactccatcaagatctacaaaccgcacagctcgacggcccccacactgaagcac
cgctgtcagaggagtgtgtgtgcgctacagtggaagcctctgtgcggatcggctctggct
gtggcctgtcagtcctgcctgctcatctggcatgtggaccctgcgtctctgtccaccagg
ccgtcgtcaggctgtgcgcaggtcttgtctcaccccggtcactctcccatcacctccatc
gcctggtcacccaccggctccctgctggtgtctgcgtctcctgtcgacacggccatgatg
gtgtgggacgtggcggcggagagctgtgtgccgctgcggagggttggcggcggtggcgtc
acgttcctctcctggtctccagatggcagtcgactgctggccgccacaccgtctgctctc
ttcagggtttgggagacgcgtatgtggacgtgtgagagatggccgtgtctgaaaggcagt
tgtcagtcagcgtgctggagtccagacggagcctgtctgctgttgagtattcagggagag
aggctgatctacgcgctctccttctctgatctcacaggaggtccgaaagccgctacagtg
gtggccgatctgtctgagaccagctttcctggacctgaaggagatctgactgtcggagga
gaggtctgctctctgtcttgggatcctcgaggtgaaagactcgctgtgctgctgaaagga
gatgcgcagtccactgatcatccttcagtcatcgccgtgtttaagacgcgctgcagtcct
gcatttgagctgctgccgtgtgggtttgtgatgggcgaagctggagccgaacccagattc
atgcagttccacccgcacttccagcacggcgctctgctgacggtgtgctggtctgacggc
agaatcacacacgtgccattttacttcagcagtgctggactctcagactcacagcggccg
gcggctctgagcactgctgaccgctccatcagcagactctacactgaagatctacactga

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