Danio rerio (zebrafish): 378721
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Entry
378721 CDS
T01004
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1
KO
K24887
GTP-binding protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
378721 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
dre03016
]
378721 (gtpbp1)
03012 Translation factors [BR:
dre03012
]
378721 (gtpbp1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
378721 (gtpbp1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
378721 (gtpbp1)
Translation factors [BR:
dre03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
378721 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
378721
NCBI-ProteinID:
NP_998640
ZFIN:
ZDB-GENE-030909-12
Ensembl:
ENSDARG00000053467
UniProt:
Q6PFN0
A0A8N1TRQ8
LinkDB
All DBs
Position
3:33440641..33459767
Genome browser
AA seq
657 aa
AA seq
DB search
MASLTTTDPVFNPGAMGLPESVVPASMFAPGRGCGDDDESDCFDDGDMFNGETVDLGIDF
SSKLALVSPNGEQYDLLLRQLRERMDEGCGETIYVLGVGSDGGDYGLNESDMQASVATVR
SMCEQIEADLILLRERTEAGGQVRDYLIRRRVGEADFLEVRVAVVGNVDAGKSTLLGVLT
HGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTKIC
EKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMIGSNAGIVGMTKEHLGLALALNV
PVFVVVTKIDMCPANILQETLKLLQKILKSPGCRKIPVLVQNKDDVIVTASNFSSERICP
IFQISNVTGENMDLLKMFLNLLSSRSSFKDHEPAEFQIDDTYSVPGVGTVVSGTTLRGLI
RLNDTLLLGPDPLGAFLSITVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVS
PRLNPQAYWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMTRDCLRTGDKATVH
FRFIKTPEYLHTDQRLVFREGRTKAVGTITKLLLSTNNQPSNSKPPQIKMQSTKKTPARR
EDGGAPSSEEAISTAPPAAQNTPQQPKSGGRRRGGQRHKGKPQSNSTVTLAGAVGGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgttaacaacgacggatcctgtttttaatcctggggccatggggctaccagag
tctgttgttcccgctagcatgttcgctccaggtcggggatgcggcgatgatgacgagtcg
gattgcttcgatgacggggacatgttcaacggcgagaccgtggatctcggcatcgacttc
tccagcaagctagccctagtcagtcccaatggtgaacagtatgacttattactacggcag
ctgcgtgagaggatggacgagggctgcggggagacaatctatgttttgggggtgggttca
gatggaggagactatggattgaatgagagtgacatgcaagcatccgtggccacagtgagg
tctatgtgtgagcagattgaggcggacctcatcttgttgagagagcgcactgaggctggc
ggccaggtcagagattatctgattcgtcgccgggtaggagaagcagactttttagaagtt
agggtggctgtagtggggaatgtggatgccggtaagagcacacttctgggtgtgctgact
catggagagttggataatggccgtggctttgcgcgacagaagctcttcaggcacaagcac
gaaatggagagtggccgcaccagcagtgtgggcaatgacatcctaggatttgatcaggaa
ggccaggtagtcaacaaaccagacagtcacggaggcagcctggattggaccaagatctgc
gagaagtcttctaaagtcattacatttattgaccttgctggccatgagaagtacctgaag
acgactgtgtttggaatgactggtcatctgccagatttctgcatgctgatgattggaagt
aacgcaggaattgttggcatgaccaaagagcacctgggtttggcattggccctcaacgtt
cctgtgtttgtagtggttactaagattgacatgtgtcctgctaatatacttcaagaaacc
ctgaagcttctccaaaagatattgaagtctccaggctgcagaaagatccctgtcctagtt
cagaacaaagatgatgtcatcgtcacagcgtccaacttcagctctgagagaatatgtcca
atcttccagatctctaacgtcacaggagagaacatggacctactaaagatgttcctgaac
ctgctgtcctccagaagctcattcaaagaccacgagcctgctgaattccaaatagacgac
acatattcagtaccaggtgtaggaacggtagtatctggaactacgctacgagggctgatt
cgactcaacgacactttgcttcttgggccagacccgctgggtgcttttctctccatcact
gtcaaatccattcaccgcaagaggatgcctgtaaaagaggtccgcggtggacagaccgcc
tcttttgctctgaaaaagatcaagcgctcttcaataaggaaaggaatggtcatggtgtcg
ccaagattaaacccacaggcatactgggagtttgaggcggagatactagttttacatcac
ccgacaaccatctcacctagatatcaagcaatggtgcactgcggtagcataaggcagaca
gccactatcctgtctatgaccagagactgcttacgcacaggagacaaggctaccgtacac
ttccgcttcatcaagaccccagagtacctgcacacagaccagaggctcgtcttcagagag
ggaagaaccaaagctgtgggcaccatcactaagttactcctgtcaacaaataatcagcca
tcaaactccaaacctcctcaaattaagatgcagtcaacaaagaaaaccccggctagaaga
gaggatggaggagccccgtccagtgaggaggccataagcacagcaccgcctgccgctcag
aacacaccacaacagccaaagtctggaggcagaagacgaggaggtcagcggcacaaaggc
aaacctcagagcaactccacagtgaccctcgccggtgccgtcggtggatgttaa
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