Danio rerio (zebrafish): 378728
Help
Entry
378728 CDS
T01004
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
378728 (siah2l)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
378728 (siah2l)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
378728 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
378728
NCBI-ProteinID:
NP_956721
ZFIN:
ZDB-GENE-030922-1
Ensembl:
ENSDARG00000044381
UniProt:
G8JL17
LinkDB
All DBs
Position
21:complement(38657966..38717856)
Genome browser
AA seq
330 aa
AA seq
DB search
MSRPSSAGGAAGGLGAGKAGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAGVSGSVAGS
GTVPAAAVALPVAALPGQSPELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCP
TCRGPLTPSIRNLAMEKVASTLPFPCKYSSAGCLLSLHHSEKPEHEEVCEFRPYTCPCPG
ASCKWQGSLEEVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLV
LEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIM
NSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctctgcgggtggagcggccggaggactcggagctggaaaagcagga
ggaagtaagcatggaggttctggaggaacaactgcctctgctgccgccgccgccgctgct
gccgcggccgccgcagcagctgcagccgccgcgggggtgtccggctccgtcgcgggttct
ggtacggttcccgcagcagctgtagcgcttccagtcgcggctcttccgggacagtccccc
gagctgacagcgctgtttgagtgcccggtgtgtttcgactatgtgctgccgccgatcctg
cagtgccaggctgggcatctggtgtgtaaccagtgtcggcaaaagctcagctgctgcccg
acctgtcgcggccctctcacgccgagcatacggaacttggcaatggaaaaagttgcatct
actctgccgtttccgtgtaagtattcctcagctggatgtctgctgtctcttcaccacagc
gagaagccagagcatgaagaagtgtgtgagtttcgtccgtacacttgcccgtgtccaggg
gcctcctgtaaatggcagggctccctggaggaagtcatgccacatctcatgcatgcccac
aaatccattaccaccctgcagggtgaggacattgtctttctggccacggacatcaaccta
cctggggcagtggactgggtcatgatgcaatcgtgtttcggccaccacttcatgctggtt
ctagaaaagcaggaaaaatacgaaggacaccaacagttcttcgccatcgtgctgctcatt
ggcacacggaagcaagcagagaactttgcctaccgcctcgagttgaatggcaaccgtagg
cggctcacgtgggaggccacaccacgttcaatccatgacggtgttgcagcggccatcatg
aacagtgactgtcttgtttttgatacctccattgcccatctgtttgcagacaatggcaac
ttgggtatcaacgtgaccatctctatgtgctga
DBGET
integrated database retrieval system
