Danio rerio (zebrafish): 378993
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Entry
378993 CDS
T01004
Symbol
satb1a
Name
(RefSeq) DNA-binding protein SATB1a
KO
K23225
DNA-binding protein SATB1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
378993 (satb1a)
03036 Chromosome and associated proteins [BR:
dre03036
]
378993 (satb1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
378993 (satb1a)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
378993 (satb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
HTH_3
Motif
Other DBs
NCBI-GeneID:
378993
NCBI-ProteinID:
NP_001073631
ZFIN:
ZDB-GENE-031010-36
Ensembl:
ENSDARG00000057649
UniProt:
Q1LUN2
LinkDB
All DBs
Position
19:complement(20453808..20482352)
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AA seq
728 aa
AA seq
DB search
MDHLATTSSTQGPALCEPSYPPCKMARMENCRDLPVPGVTPVSSKQTSHTNRRKGSLLPV
FCMVEQSDVPPSEGKRSEHAEFVLLKKDLLFSQITEAALQELGYTHTAAALATGQIQVGH
WNPVALSSVTDVSDATVGDMLQDLYHVITLRIKLHSVSKLEDLPAEQWTHSTVRNALKDL
LKEMNQSTLAKECPLSQSMISSVVNGTYYASISAARCQEFGQWYKHYKRTKAIMGDMSRQ
CTQPSSSSQPSMFQQPMEGSSAESRGVVQMQAGMPGLVMAQLLSQQHAMSQLLTHAHTHS
HIPHPAPLKTPPKCNVSPPTVTQCPSPVTDVSPEIYHWVREELKRAGVSQAVFARVAINR
TQGLLSEILRKEEDPRCASQSLLVNLRAMQSFLQLPQSQRDSIYVEERERNLNTAYNTNT
SSPLPIQAKLSPVSKDIVVKVECDDTGINYGIYEEIQQEMRRAKVSQALFAKVSAAKSQG
WLCELLRWKEEPSPQNRTLWENLSLIRQFLNLSQSERDIIYDQESNTGQTFYSEKHTRPL
TEQLQVIPQHMVALKQHQQLHKIPPQHHQLFLQHHLMAGSLKDTYMAPNFGGRSLPPEAH
AILQSFIQEVGLHPDQEAIHTLSAQLGVAKEAVLSFFSGHNWLRQEQDNRREIEIEDGED
DYMEAEDEFEENIEKTNASMMTGKQDLSADEQNAATQTRFIITIKQEEEFPCKEENGESP
AHCQFINS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttggcgaccactagtagcacccaggggccggccctgtgtgaaccctcttat
cctccctgtaaaatggctcgtatggagaattgtagagatctgcctgtacctggagtcaca
cctgttagctccaaacagacatcacacactaacaggaggaaaggtagtttacttccagta
ttctgcatggtggaacaaagcgatgtcccaccatccgaagggaagcggtcggagcatgca
gaatttgtgctgctgaagaaagacctgctgttcagccagattacagaagctgcattgcaa
gagctgggatacacacacaccgcagcggctctggctacaggtcagattcaagttggccat
tggaaccctgtggctctgtccagcgtgacagatgtctctgatgcaacagtaggagacatg
cttcaagacctataccacgttatcaccttaagaataaagctgcacagtgtttctaaatta
gaggacttgcccgctgagcaatggactcattctacagtcagaaatgctctaaaggatctg
cttaaagagatgaatcagagcacattggctaaagagtgtccattatctcagagcatgatt
tcatcagtggtaaacggcacttactatgccagcatctctgctgcgagatgtcaagagttc
ggccagtggtacaaacactacaagaggacaaaagctataatgggtgacatgagcaggcag
tgcactcagccctcttcttccagtcagccctcgatgttccagcagccaatggaaggcagc
agtgcagagtcacggggtgttgtccagatgcaggctgggatgcctggtctagttatggct
cagcttctctcccagcaacacgccatgtctcagctcctcacacacgctcacacccactca
cacatacctcatcctgcacctctaaagactcctcccaaatgcaatgtgtcgcctccaaca
gtaactcaatgtccttctcctgtcaccgacgtgtcacctgaaatttaccactgggtgcgc
gaggagctgaagagggcaggcgtttcccaagctgtgtttgcacgagtggccattaacagg
acacagggtctgctgtctgagatcttgcgaaaggaagaggacccaagatgtgcatctcag
tctctattagtgaacctgagagccatgcagagcttcctgcagcttccacagagccagaga
gactctatctatgtggaggaacgagagagaaacctcaacactgcctacaacactaataca
agctcacctctgcccattcaggccaaactttctcctgtttccaaggatattgtagtgaaa
gtggaatgtgatgacactggaataaactacggcatttatgaagaaatacagcaagaaatg
aggcgagcaaaagtgtcacaggccttgtttgcaaaagtctctgcagccaagagtcagggc
tggctgtgtgagctgctacgctggaaggaggaaccatctcctcagaatcgtactttgtgg
gaaaacctgtctttgataaggcagtttctaaacctcagccaatcagagcgagatattata
tatgaccaggaaagcaatactgggcagaccttctactcagagaaacacacaagaccactg
actgaacagctgcaggtgattccacagcatatggtggctctaaagcagcaccaacaactg
cacaaaattccacctcaacaccatcagctcttcctccaacaccatctcatggccggaagt
cttaaagacacttacatggccccaaatttcggaggcaggtctttaccaccggaagcccat
gccatcctgcagagtttcattcaggaagttggactacatccagatcaggaggccattcac
acattatctgctcaactgggtgtagccaaagaggccgttctcagcttcttcagtggtcac
aattggcttagacaagagcaagacaacaggagagaaattgagattgaggatggagaagat
gattacatggaggcagaggatgaattcgaggaaaacatagagaagacaaatgcaagcatg
atgacagggaaacaagaccttagtgcagatgagcagaacgcagctacacaaactcggttt
atcattactattaaacaggaggaggagtttccatgcaaggaggagaatggtgaaagcccc
gcccactgccagttcataaactcataa
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integrated database retrieval system
