KEGG   Danio rerio (zebrafish): 386637
Entry
386637            CDS       T01004                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    386637 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    386637 (taf12)
   03036 Chromosome and associated proteins [BR:dre03036]
    386637 (taf12)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     386637 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     386637 (taf12)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     386637 (taf12)
    STAGA complex
     386637 (taf12)
    TFTC complex
     386637 (taf12)
    SAGA complex
     386637 (taf12)
    SLIK complex
     386637 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Tic110
Other DBs
NCBI-GeneID: 386637
NCBI-ProteinID: NP_938182
ZFIN: ZDB-GENE-031030-5
Ensembl: ENSDARG00000104030
UniProt: Q6P013
LinkDB
Position
16:complement(38666686..38672868)
AA seq 162 aa
MTQYPAQTSRSNFYTVVKAEASSTPPLSSSMANSTVAPGKLPGTPGPAGRLSPEGPQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLH
LERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtatccagcacagaccagtcgctcgaatttctacacggttgtgaaagcagaa
gcctcttcaacaccgccgctgtccagcagcatggccaacagcacggtcgctccggggaaa
ctgcccggcacccccggaccagcaggcagactgagcccagaaggacctcaggtgctcagt
aagaagaagctgcaggaccttgttcgagaaattgaccctaatgagcaacttgatgaggat
gtggaagaaatgctgttgcagatagctgatgacttcattgagagcgtggtgactgctgca
tgccaactggcccgacacaggaagtcaagcactcttgaagtaaaagacgtccagctacac
cttgaacgacagtggaacatgtggattcctggttttggctcagatgagatccgaccgtat
aagaaggcttgcaccacagaagctcacaaacagagaatggcactgatccgcaaaacaacc
aaaaagtag

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