KEGG   Danio rerio (zebrafish): 386704
Entry
386704            CDS       T01004                                 
Symbol
sox8b
Name
(RefSeq) transcription factor SOX-8b
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    386704 (sox8b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    386704 (sox8b)
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 386704
NCBI-ProteinID: NP_001020636
ZFIN: ZDB-GENE-031114-1
Ensembl: ENSDARG00000037782
UniProt: Q52W08 A0A8M1N736
LinkDB
Position
3:complement(67391016..67400134)
AA seq 356 aa
MSEEREKCSSPTGSCSSECPDECDSDPSCSPAGPAALRMGQQAEDEDGRFPVCIRDAVSQ
VLKGYDWSLVPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTL
GKLWRLLTESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGHAESEAGSELMQHM
YKAEPGMGRLTGSPDHITDHTGHTHGPPTPPTTPKTEHPQAPKQNIDFSNVDISELSTDV
IGNLTFDLQEFDQYLPLTPDQGACSRRAPPAGAHLHPQRVHIKTEQRSPQHYSEHSSTLY
SSSSAQCEYTEHSFYSPYSSYPYPYPYLHRPILNIPAPHSSSAHWDPPVYTTLSRP
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcgaggagcgggaaaagtgcagcagcccgaccgggtcctgcagctccgagtgtccg
gatgagtgcgactctgacccgtcctgctctcccgccggacccgccgcgctccggatgggt
caacaagcggaggatgaggacggcagatttccggtgtgtatccgggacgcggtgtcgcag
gtgctgaagggctacgactggtctctggtgcccatgccggtgcgggtgagcggatctggg
aagagcaaaccgcacgtcaagagacccatgaacgcgtttatggtttgggctcaagccgcg
cggaggaaactggcggaccagtacccgcacctgcacaacgcggagctcagcaaaacactc
ggcaaactctggagactgctgacggagagcgagaagaggccgttcgtggaggaggcagag
cgactgagggtccagcacaagaaggatcatccggattataaataccagcccaggagacgg
aagagggtggagccgggccacgccgagtctgaagccggctccgagctgatgcagcacatg
tataaagcggagccgggaatgggtcgactgactgggtcaccggaccacatcactgaccac
acagggcatcctcatggtccaccgactcctccaaccacccccaaaacagagcatcctcag
ggccccaaacagaacattgacttcagcaacgtggacatctccgagctcagcactgacgtc
atcggcaacatgacctttgacctgcaggagtttgaccagtacctgcctctgaccccagat
cagggcgcctgcagccggagggcgccccctgctggagcacacctgcacccacagcgagtg
cacataaagacggagcagcggagcccgcagcactacagtgagcacagcagcacgctttac
agcagcagcagcgcacagtgtgaatacacagagcacagcttctacagcccgtactccagc
tacccgtacccatacccatacctgcacaggcccatactcaacatccccgcaccgcacagc
tcctctgcacactgggacccgcccgtctacaccactctgtccagaccctag

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