Danio rerio (zebrafish): 386704
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Entry
386704 CDS
T01004
Symbol
sox8b
Name
(RefSeq) transcription factor SOX-8b
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
386704 (sox8b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
386704 (sox8b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
386704
NCBI-ProteinID:
NP_001020636
ZFIN:
ZDB-GENE-031114-1
Ensembl:
ENSDARG00000037782
UniProt:
Q52W08
A0A8M1N736
LinkDB
All DBs
Position
3:complement(67391016..67400134)
Genome browser
AA seq
356 aa
AA seq
DB search
MSEEREKCSSPTGSCSSECPDECDSDPSCSPAGPAALRMGQQAEDEDGRFPVCIRDAVSQ
VLKGYDWSLVPMPVRVSGSGKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTL
GKLWRLLTESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKPGHAESEAGSELMQHM
YKAEPGMGRLTGSPDHITDHTGHTHGPPTPPTTPKTEHPQAPKQNIDFSNVDISELSTDV
IGNLTFDLQEFDQYLPLTPDQGACSRRAPPAGAHLHPQRVHIKTEQRSPQHYSEHSSTLY
SSSSAQCEYTEHSFYSPYSSYPYPYPYLHRPILNIPAPHSSSAHWDPPVYTTLSRP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggagcgggaaaagtgcagcagcccgaccgggtcctgcagctccgagtgtccg
gatgagtgcgactctgacccgtcctgctctcccgccggacccgccgcgctccggatgggt
caacaagcggaggatgaggacggcagatttccggtgtgtatccgggacgcggtgtcgcag
gtgctgaagggctacgactggtctctggtgcccatgccggtgcgggtgagcggatctggg
aagagcaaaccgcacgtcaagagacccatgaacgcgtttatggtttgggctcaagccgcg
cggaggaaactggcggaccagtacccgcacctgcacaacgcggagctcagcaaaacactc
ggcaaactctggagactgctgacggagagcgagaagaggccgttcgtggaggaggcagag
cgactgagggtccagcacaagaaggatcatccggattataaataccagcccaggagacgg
aagagggtggagccgggccacgccgagtctgaagccggctccgagctgatgcagcacatg
tataaagcggagccgggaatgggtcgactgactgggtcaccggaccacatcactgaccac
acagggcatcctcatggtccaccgactcctccaaccacccccaaaacagagcatcctcag
ggccccaaacagaacattgacttcagcaacgtggacatctccgagctcagcactgacgtc
atcggcaacatgacctttgacctgcaggagtttgaccagtacctgcctctgaccccagat
cagggcgcctgcagccggagggcgccccctgctggagcacacctgcacccacagcgagtg
cacataaagacggagcagcggagcccgcagcactacagtgagcacagcagcacgctttac
agcagcagcagcgcacagtgtgaatacacagagcacagcttctacagcccgtactccagc
tacccgtacccatacccatacctgcacaggcccatactcaacatccccgcaccgcacagc
tcctctgcacactgggacccgcccgtctacaccactctgtccagaccctag
DBGET
integrated database retrieval system