Danio rerio (zebrafish): 386772
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Entry
386772 CDS
T01004
Symbol
rbpja
Name
(RefSeq) recombination signal binding protein for immunoglobulin kappa J region A
KO
K06053
recombining binding protein suppressor of hairless
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
386772 (rbpja)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
386772 (rbpja)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Other transcription factors
Others
386772 (rbpja)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
386772
NCBI-ProteinID:
NP_942579
ZFIN:
ZDB-GENE-031117-1
Ensembl:
ENSDARG00000003398
LinkDB
All DBs
Position
1:15838912..15848303
Genome browser
AA seq
496 aa
AA seq
DB search
MAPVVTGKFGELPQPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCV
YLMGCGWKKKKEQMEREGCSEQESQPCAFIGIGNSEQEMQQLNLEGKNFCTAKTLYISDS
DKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRL
RSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCS
VTGMALPRLIIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPC
PKETNKEMINDGASWTIISTDKAEYTFYEGMGPVPSPVTPVPVVESLQLNGGGDVAMLEL
TGQNFTPNLRVWFGDVEADTMYRCGESVLCVVPDISAFREGWRWVRQPVQVPVTLVRNDG
IIYSTALTFTYTPEPGPRPHCSAAGAILRANSNSSTSPSSSSSASSLLLQSAVDSQAGYG
ASGGVSTSSSSAMSVS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttgtgacagggaagtttggggagctccctcagccaaagcgtttaacaaga
gaggcgatgcgcaattacttgaaggagagaggagatcagacagtgctcatactgcatgca
aaggtcgcacagaaatcgtatggcaatgaaaaaagattcttctgtcctccaccctgtgtg
tacctgatgggttgtggttggaagaagaagaaggagcagatggagagagaaggctgttcg
gagcaagagtctcaaccttgtgcctttatcggcattggaaacagtgaacaagaaatgcag
cagctcaacttggagggcaagaatttttgcacagcaaaaacattatacatttccgattct
gacaaacggaagcacttcatgctgtcggtgaaaatgttctacggtaatagcgcagatatc
ggcgtcttcctcagcaagcgaatcaaggtcatctcaaaaccttccaaaaagaaacagtcg
ctgaagaatgcagacctgtgcatagcttctgggacaaaagtggctctttttaaccgcttg
cggtctcagactgtcagtacgcggtaccttcatgtggaagggggaaacttccatgcaagt
tcacaacagtggggagccttctatattcatctgttggatgatgatgagtcagagggagag
gagtttacagtcagagacggttacatccattatggtcagacggtgaagctggtgtgctct
gtgacgggcatggctctaccccgactgatcattcgtaaagtggacaagcagacagcgcta
atggacgccgacgatcctgtgtcccaactacataaatgtgccttctaccttaaagataca
gagaggatgtacctctgcctgtcacaggagaggataattcagttccaggccacaccctgt
cccaaagaaacgaacaaagaaatgatcaacgatggtgcatcatggacaatcatcagcaca
gacaaagcagagtacactttctatgaggggatgggccctgtaccctcacctgtcacacca
gtgcctgttgtcgagagtttacagctgaatggaggaggagatgttgccatgcttgaactg
acaggacagaattttacacccaacctcagagtttggtttggagatgtggaggcagatact
atgtacagatgtggcgaaagtgtgctctgtgtagttcctgacatctctgcgttccgtgag
ggatggcgttgggttcggcagccagtgcaggttcctgtgactttggtccgtaacgacggc
atcatctactccacggctttgacttttacctacacgccagagccaggacctcggcctcac
tgcagcgccgcaggagccatactgcgggccaacagcaactcctccacatcaccatcttca
tcttcctcagcctccagcctattgctgcagtcagccgtcgacagccaggcaggatacggc
gcatcaggaggagtatctacatcttcctcctctgccatgtccgtctcctaa
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