KEGG   Danio rerio (zebrafish): 386844
Entry
386844            CDS       T01004                                 
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    386844 (ssrp1a)
   03036 Chromosome and associated proteins [BR:dre03036]
    386844 (ssrp1a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    386844 (ssrp1a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     386844 (ssrp1a)
SSDB
Motif
Pfam: PH1_SSRP1-like SSrecog Rttp106-like_middle HMG_box POB3_N SSRP1_C HMG_box_2 HMG_WDHD1 EphA2_TM
Other DBs
NCBI-GeneID: 386844
NCBI-ProteinID: NP_997967
ZFIN: ZDB-GENE-031118-9
Ensembl: ENSDARG00000037397
UniProt: F1QEB4
LinkDB
Position
14:complement(21980446..22015326)
AA seq 705 aa
MGDTLEFNDIHQEVKGSWNDGRLRFSKQTVVYKSHKTGKVDSIPAPDLSEAQWRRVCLGH
GLKLATSTGHIYKYDGFKETDYEKISAFFKANYKVELEEKDMCVKGWNWGTAKFAGSLLS
FDVSDSPVFEIPLSSVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNILSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLALNMSEDEVEKRYE
GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQFTFSNIEREEYGKLFDFVN
AKKLTIKNRGFKEGMKGAEDYSDSDEDQHDAYLERMKEEGKIREEGDGSDDSEGDSDESF
NPGEEDDDVPEEYDSNASVSDSEGDDGDSEDEGKKKKVEKKPKKVVKEKKERKPRKEKKV
KDAAAPKRPMSAYMLWLNGNRERIKSENPGISITEISKKAGEMWKQLGKDKKEEWDKKAE
EAKRQYEKAMKEYKESGGGAAAATKEKKKKGGKVEAKKKSGGEKEKKKEGGNDSFKSKEF
ISSEESSSESDHDRGSKRKASDDDDEEEEAAASTPASSEEESGSD
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgggagacactctggagtttaacgacattcatcaggaggtgaagggatcttggaatgat
gggcgtctgaggttcagcaagcagactgtggtctataaaagccataaaacagggaaggtg
gacagtatccccgctcccgacctctccgaggcccagtggcgtcgagtctgtctgggtcat
gggctcaaactggccaccagcactggacacatctacaaatatgacggcttcaaagaaaca
gattatgagaaaatctcagcgtttttcaaagcgaactacaaagtggagttggaggagaag
gacatgtgtgtgaagggctggaattggggaactgccaaatttgcagggtctctgctgtct
tttgatgtaagcgacagtcctgtctttgagatcccactgtccagtgtatcccagtgtgca
accggcaagaacgaggtgactgtggagtttcatcagaatgatgatgctgaggtttcactc
atggaggtccgcttttatgtcccgccaaacactggagacgacggctcagaccctgtggag
gcatttgcgcagaatattctgtcaaaagcagatgtcattcaagctactggagacgctgtg
tgtatcttcaaagagcttcagtgccttacgccgagaggaaggtatgatatccgtatctac
ccgacctttctgcacctccacggtaagacttttgactataagatcccctacaccactgta
ctgcgtctcttcctgctcccacacaaggaccagaggcagatgttttttgtgatcagcctc
gatccacctattaaacagggtcagactcgataccatttcctcatcctcctgttctccaaa
gatgaagacatcagcctggctctcaacatgagcgaagatgaggtggagaagcgttatgaa
gggaagctcagcaagaacatgtctggtccgctctatgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacagtgcctggaaacttccagggtcactcaggttctcag
tgtataacgtgtgcatataaggcgagctcagggctgctgtatccactggagagaggcttt
atttatgtgcacaagccaccagttcacctgcgctttgaagaaatctcctgcgtcaacttt
gccagaggaaccacaaccacacgatcatttgacttcgagattgagaccaagcagaacaat
caattcaccttcagcaacattgagagggaagaatatggaaaactttttgactttgtcaac
gccaagaagctgactatcaagaacagaggatttaaagagggcatgaaaggagcagaagac
tacagtgactctgatgaagaccagcatgacgcttatctggagagaatgaaggaagagggc
aagatcagagaagagggagatggcagcgatgactctgaaggcgacagcgacgagtctttc
aaccctggagaagaggatgatgatgtcccagaagagtatgacagtaacgcttcagtgagt
gatagtgaaggagatgatggagacagcgaggatgaaggcaagaagaaaaaagttgaaaag
aagcccaagaaagtggtgaaggagaagaaagagcgaaaaccacggaaagagaaaaaggtg
aaggacgcagctgctcctaagagacccatgagtgcttacatgctgtggctgaacggcaac
agagagcgcatcaagagtgaaaatcctggaatatcaatcactgaaatctccaagaaggcc
ggagaaatgtggaaacagctgggaaaagacaaaaaggaggagtgggacaaaaaagcagaa
gaggccaagaggcaatatgaaaaagccatgaaagaatacaaagagagtggaggaggagcc
gctgctgctactaaagaaaagaaaaagaagggaggaaaggtggaggccaagaagaaaagc
ggtggagagaaggagaaaaagaaagagggtggaaacgacagctttaagagtaaagagttc
atctccagcgaggagagctcatcggaatccgaccacgacagaggcagcaaacgcaaggct
tctgatgatgatgacgaggaggaagaagcggcggcctctactccagcaagctcagaggag
gagtcaggatctgactga

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