Danio rerio (zebrafish): 386856
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Entry
386856 CDS
T01004
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha precursor
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04010
MAPK signaling pathway
dre04020
Calcium signaling pathway
dre04144
Endocytosis
dre04510
Focal adhesion
dre04540
Gap junction
dre04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
386856 (pdgfra)
04020 Calcium signaling pathway
386856 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
386856 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
386856 (pdgfra)
04540 Gap junction
386856 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
386856 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dre01001
]
386856 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
dre04090
]
386856 (pdgfra)
Enzymes [BR:
dre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
386856 (pdgfra)
Protein kinases [BR:
dre01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
386856 (pdgfra)
CD molecules [BR:
dre04090
]
Proteins
386856 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Kinase-like
Motif
Other DBs
NCBI-GeneID:
386856
NCBI-ProteinID:
NP_571534
ZFIN:
ZDB-GENE-990415-208
Ensembl:
ENSDARG00000070494
UniProt:
Q9DE49
A0AB32TA45
LinkDB
All DBs
Position
20:complement(22435179..22476263)
Genome browser
AA seq
1456 aa
AA seq
DB search
MGFLKTHLVFGIVLLGVFSDVSKPWLVTDKEKEEFMLTPHSDFNITCFGMRRVTWVEPLP
FNIKVHSGFNYSTLMITDAVASNTRFYTCQHEDHSETETDIYIFVQDPDVPFVSEHDAET
DEIGTTIPCHVTNPHSEVMLRDLQSGDEVTVLYDPKLGFFGTIPPGQYVCETTVNGKTVR
SIIYNVTNDMATDVPEVVDQNFSIQLSASMEDLKEGDSVNLTCETPAGMAFHQQWLHPQK
QAKDGVPIKLTLQDKIQYILNIPKASVEDTGRYECSVTNQLTRQTRSKSLGITVHESSFV
EIISNGIGPVEVVSLLEEKEFTIYIDADPEPKVTWFKDGQPLEDSYIFSKTTHLENLRYE
NILILRHPVEEDSGIYEIVASTGSRTSQFSFKLLIEVMFPVLPQSVQAPLIWPQRESMEV
SLHSTFRLTCRGQAELSWNGPVFIDDQTNSVKKGLFISTVTISNATAVHTGEYVCSSEPF
NSTESTIYIYVPDPQTPFVPSMTPFENHVLTSYDEMEIPCRVTDPSASVSLIHMETDQVM
PSAYDSKRGFIGLFGAGTYVCRALIHGQNHDSIEYIVHGWTGGSDLRVELRAVKRTLLVG
ETITVDCVAKGSEMLEDHWKYPGKLANRGTKTVKENKLNLEIYYTLTVTNASPKDSGIYA
CSITDIMSNESQTKELTITVYDHEFVHINPLIGPVETARLDEVPEFKVDIESFPAPKVTW
LKDSAVLGDDTAEISTNLLKIGETSYKGVLNLIRAKAEDSGNYTVKAEIGSISTSYSFYL
QVKVPPVIVDLIDVHHGSAAGQEVVCTAGGSPFPEVDWYICKNLKHCANDSSQWMPLPIN
STDITVELQMNVDNHIESHIIFHHLEGTVAVRCLARNDMGVVSREVKLMSSGPHSELTVA
AAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRWEF
PRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIM
THLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEKGKKDLDIF
GINPADESSRSYVILSFEGKGDYMDMKQADTMQYVPMLEMNEASKYSPIQRSDYDHPPSH
RQFNDEAESLLSDDSAEGLTTMDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLSQGKI
VKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSL
GGTPYPGMVVDSSFYNKIKSGYRMTKPEHASSDVYELMMKCWNSEPEKRPSFHSLSDTVA
SLLPSGFKRCYERVNHDFLKSDHPAVTRVQCIDNDDAYMGVLYKNQGKMKNRESGFDEQR
LSSDSGYIIPLPDLDPLSNEDYSKRNRHSSQTSEESAIDTGSSSSTTKREGETLEDITLL
DEMCLDSGDLVEDSFL
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctgaagacacatctcgtttttgggattgtcttactaggggtgttttcagat
gtctcgaagccatggctagttacggataaagagaaagaggaattcatgctgacaccacat
tccgactttaacatcacttgctttggaatgaggagagtaacttgggtcgaaccattaccg
ttcaacatcaaagttcattctggatttaactacagtactttaatgatcactgatgcggtg
gcctctaacactcgtttctacacctgccagcatgaggatcattctgaaactgaaactgat
atctacatttttgttcaagatcccgatgttccatttgtgtctgaacacgatgctgagaca
gatgaaataggcacaacaatcccctgccacgtaacaaacccacattctgaagtgatgctc
agagatctgcagagcggggatgaggttactgtgctttatgaccccaaacttggctttttt
ggtacaataccgccaggacaatacgtctgtgagacaactgtgaatggcaaaacagtgcgg
agcatcatttataatgtgacaaatgacatggctactgacgttcctgaggttgtagaccag
aacttcagcatccagctgagcgccagtatggaggatttgaaagagggagattcagtcaac
ctcacctgtgagactcctgctggaatggctttccaccagcagtggctgcatccccaaaaa
caggccaaagacggggtcccaataaagttaactctccaagataagatccagtacatcctc
aacatcccaaaagcttctgtggaagacaccggacgctatgagtgttctgtgacaaaccag
cttactagacaaaccaggtccaaaagcctgggcatcacagttcacgagagctcatttgtg
gaaattatatctaatggtattgggccagtggaggttgtgtctcttctggaggaaaaagag
ttcactatttacattgatgctgaccctgagccaaaggtcacatggtttaaagatggacag
ccattggaggacagctacatcttctctaagaccactcatctagaaaacctcaggtatgaa
aatattctgattctccgacaccctgtagaagaagacagcggcatttatgagatcgttgct
tccaccggctccaggacttcacaattttcattcaaactcctcattgaagtcatgttcccg
gtgctgccacagtcagttcaggctccactgatttggccccagagggagagtatggaggtg
tctctgcactccactttcagactcacatgtcgaggtcaagccgagctctcctggaatggc
cctgtttttattgatgaccagaccaacagtgtaaagaaaggactctttattagcactgtg
acaattagcaatgccacagctgtccatacaggagagtacgtctgctcttctgaacccttc
aacagcactgagtccaccatctacatttatgtgccagatccacaaaccccatttgtgccg
tccatgaccccgtttgaaaaccacgtgctgacgagttatgatgaaatggagattccctgc
cgtgtgacggatcccagtgccagcgtctctctcatccacatggagaccgatcaagttatg
cccagcgcctacgacagcaagagaggattcatcgggctcttcggcgctgggacgtatgtc
tgccgagccctcattcatggacagaatcatgacagcattgagtacattgttcatggatgg
acaggagggtctgatttgcgagtggagctgcgggcagtgaagagaactctgctggtgggt
gagactatcactgttgactgtgtagccaaaggcagtgagatgctggaggaccactggaaa
taccctggcaaactggctaatcgtggaacaaagactgtaaaggagaataagctaaatctg
gagatctattatactctgacagtgactaatgcctcaccaaaagacagcggcatctatgcc
tgctccatcactgacatcatgagcaacgagagccaaaccaaagagctgactattactgtc
tatgatcatgaatttgtccacatcaatccattgatcggtccagtggaaactgccaggctg
gacgaggtgccagagtttaaagtggacatagagtctttccctgcacccaaagttacatgg
ttaaaggacagcgctgtcctgggagatgatactgcagagatcagcaccaacctcctcaaa
atcggcgagaccagttacaagggtgtgttgaacctgatcagagctaaagcagaggacagt
ggaaactacaccgtcaaggcagaaataggcagcataagtaccagctacagtttctacctt
caggttaaagttccccctgtgattgtggacctgatcgacgtccatcatggttctgctgcg
ggtcaggaagtggtatgcactgctggcggctccccattccctgaagtggactggtatatc
tgcaaaaaccttaaacactgtgccaatgattcctcccagtggatgccacttccgatcaac
tcgacggacatcacagtggaactgcaaatgaatgtggacaaccacattgagagccacatt
attttccaccatcttgagggcacagtcgctgtgcgctgtctggccaggaatgacatgggt
gttgtttcacgggaggttaaactcatgtcaagtggtccgcattcggagctcactgtggct
gctgcggttctggtgctgctggtcattgtcatcatctcactcattgtgctggtcattata
tggaaacagaaaccacgttatgagattagatggcgcgtgattgaatcagtcagtccggat
gggcacgagtacatctatgtcgatcccatgcagcttccatatgattcccgctgggagttc
cctcgggatggactcgttctgggtcgcgtcctgggttcaggagcttttggtaaagtggtg
gagggtactgcttatggactaagccgttctcagcctgtgatgaaagttgctgtgaaaatg
cttaagccgaccgcccgttccagtgagaaacaagctttgatgtcagagctgaaaatcatg
acccatctgggccctcacctaaacattgttaaccttctgggagcgtgtaccaaatcagga
ccaatctacattataacagagtattgtttctatggagatctggtgaattaccttcataag
aacagagatgggtttctcagccggcacacagaaaagggaaagaaagatctagacatcttt
ggcatcaacccagccgatgagagcagcaggagctatgtcatcctgtctttcgaggggaaa
ggtgattatatggacatgaagcaggcagacaccatgcagtacgtccccatgctggaaatg
aatgaagcctcaaaatactctcccatccagagatcagactacgatcatcctccctctcac
agacaattcaatgatgaagcagagagtcttctatcagatgacagcgctgaaggcctgacc
acgatggacctcctcagtttcacctatcaagtggctcgagggatggagtttttggcctct
aagaattgtgtgcaccgagacttggctgcacgaaatgtcctgctgtctcaaggcaagata
gtgaagatctgtgactttggactggcaagagacatcatgcacgataacaactatgtctcc
aaaggaagcacgtttcttccagtgaagtggatggctcctgaaagtatttttgataatctc
tacacaacgctgagtgatgtctggtcttatggcatcttattatgggagatcttctctctc
ggagggacgccttatcccggcatggttgtggattccagcttctacaacaagatcaagagt
ggataccgaatgaccaaacctgagcatgcgtccagtgatgtctatgagctcatgatgaag
tgctggaacagtgaaccggagaagagaccatctttccacagtctgagtgatacagtggca
tctctgctgccctcaggatttaagaggtgttatgaacgtgtgaatcatgacttcctgaag
agcgatcaccctgctgtgactcgggtgcagtgcattgacaatgacgatgcctacatgggt
gtgctctacaaaaaccagggcaaaatgaagaaccgtgagagtggctttgatgaacagaga
ctcagctctgacagcggctacatcattcctctgccagacctggatccactttctaacgaa
gactacagcaagaggaaccgccacagctctcagacatcggaggaaagcgcgatagataca
ggctctagcagctccacgaccaagcgtgagggagagactctggaggacatcaccttgctg
gacgagatgtgcttggactcaggagacctggtggaggacagcttcctgtga
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integrated database retrieval system
