Danio rerio (zebrafish): 386937
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Entry
386937 CDS
T01004
Symbol
dscamb
Name
(RefSeq) cell adhesion molecule DSCAM
KO
K06767
Down syndrome cell adhesion molecule
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
386937 (dscamb)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
DSCAM family
386937 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Interfer-bind
fn3_2
DUF6377
DUF4446
DUF6249
Motif
Other DBs
NCBI-GeneID:
386937
NCBI-ProteinID:
XP_009289749
ZFIN:
ZDB-GENE-031118-67
Ensembl:
ENSDARG00000028118
UniProt:
F1Q4W9
LinkDB
All DBs
Position
15:complement(6138423..6404531)
Genome browser
AA seq
2020 aa
AA seq
DB search
MWILAFLFLQSILNVFGEDLRSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEEYVSVVSWEKDTVSLVSGSRYLITSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFERKEVMVGH
RVELPCKASGHPPPRYRWLRDNSPLESDSRYHQSVSGLLIEATRPSDAGSYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEFDITWYRNAEKIYQGINV
RITGINNENLVMEGMAKSDGGAYQCFARNGKMSTQDLVQVVLEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPTVTWTLDDDPVIKDSNHRMDRIITTEGHVLSYLNVSHTQVSDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNVTAIAGRDTYIHCRIIGYPYYSIKWYKD
SNLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVISGDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPKDQDGIYGKSVTLNCSAKGNPIPTI
VWNHSKGAGVPQFQPIALNSGSRVQLLENGSLLIKHVLEEDAGFYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVTV
KEVGDEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSASWASSQMTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLEAISSQGIKVTWKPPHKHLQNGLIRS
YQVCYREFGTGGSPQYNTINVDTTGDIETLTLDNLKKYTQYEVRVQAANRAGMGPTSEEI
TITTLEDVPSRPPENVVTTATTPETISLSWSALPKEALNGMLLGYRVIFWANLPDGELGE
IRNITTTKPSLELERLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
STSSVVFVSWLPPHKLNGIIRKYIVFCSNPYPTVISEFEAAPDVYFRRLTNLNQNWQYSI
WVVAVTAAGRGNTSEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCKAVGDPPPTIKW
LKGNNGTPAPVSIDGRRSAHNNGSFVIRTVKAEDSGYYRCVASNNWGSDEIMLNLQVQVP
PDQPRLTVTKTTTTSITLFWIPGDNGGSSIRGYILQYSEDNSEEWGSYSISPSERSYRLE
NLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCPIDSFTLEYRPVDTTKWTMVKRDSLTKSHILYDLQEATWYELQMRVGNSAGTAEK
RVLFATLNMDGSTIAPLPKSVDPSQENRQGNEGLKMMVTIICILVAICMVFIVLLVLRRR
RREQRLKRLRDAKSLAEMLMSKNARTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHPPVSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPAGELVHLPPYLRMDFLLNRGAASS
GREATGQTCMDPQKSRITKRPALLAPTPSETPSSALSSSGPPSREAVQQWQPGTASTLPQ
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcatttctctttctccagagcatcctgaatgttttcggtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcaccaca
ggggcactggtgccgtgtcctgccgcggctgtgccccctgccacgctgcgctggtacctc
gccaccggggaggagatctacgatgtaccaggcatccgccatgtgcatcccaatggcacg
ctacagatctacggcttcctgccatccagctttagtaacctaatcaatgataatacgtac
tactgcacagcggaaaacccatcaggaaagatcaggagccaagatctacacattaaggcc
gtattccgggagccgtacacagtgcgggtggccgatcagagagtcatgcgagggaatacg
gcagtcttcaagtgcattatcccggcctcggtagaggagtacgtcagtgttgtatcatgg
gagaaagacacagtctcacttgtctcaggatcaagatatcttattacatccacgggggcc
ttgtatattctggatgtgcagtcggaggatgcggtgaatatttatcgctgtaccacgcgg
caccgatacacaggggagaccagacagagtaacagtgcccgactgcttttatcagaacct
gtggattctgctccggtgattctggatgggtttgaacggaaggaggttatggtgggtcat
cgggtggagctcccatgtaaagcatctggtcaccctccgcccaggtatcgctggctgaga
gacaacagtccattggaatcagatagccggtaccatcagagtgtatcaggcctcctcatc
gaggccacacgacccagcgatgcaggcagttatgtgtgtgaggtgtggaacagcttcgga
aatgccaaagtggtcggacggctggttgtcaaacagcctctgaaagcagtggtgagccca
cggaaggtgaggggcagcgtgggtagccaagtgtctctgttctgtagtgtgactggctca
gacgagtttgacatcacctggtacaggaatgcggagaagatctatcagggtataaatgta
cgaatcacgggcattaacaacgagaacctggtgatggagggaatggccaagagcgatgga
ggagcgtatcagtgctttgctcgaaatggaaagatgtccacccaagacttagttcaggtc
gtcttggaagatgggacaccaaagatcctctctgccttcagcgagaaggttgtgagcccg
aatgagcccatctcgctggtgtgtcacgtgaaaggaacccccctccccaccgtcacctgg
accctggacgacgaccccgtcatcaaagacagcaaccaccgcatggaccgcatcatcacc
acagaaggccacgtgctcagctacctgaatgtttctcacacgcaggtcagcgatgggggg
gtctaccgctgcacctgcaacaactcggccggatcggtctcctatcaggctcgaataaac
gtaagaggtcctgccagtattcgaccaatgaaaaatgtcactgccatcgctgggagggac
acgtacatacactgtcgcatcattggttacccgtactactctattaagtggtataaggat
tccaatctgctcccattcaaccatcgccaacgtgccttcgagaacaacggcacactcaag
ctgtccaatgtgcaaaactcagacgagggagagtatacatgctacgtgttggtggatcca
gagaaacaaattcacaggagtgtccatgtgacagtaaaagtgccccctcttatccaacac
tccgactctcagagtgcttccattggtcagcgtgtcttcatcccatgtgtggtcatatcc
ggcgacctgcccatgtctataacctggcacaaagatggacgaccaatcaacgccagcctg
ggtgtcaccatcgacaacatagacttcaccagctcactgcgcatttcaaacttgtcggaa
attcataatggcagttacacctgcatcgcccggaatgaagctgcagccgtcgaacatagc
atacagctcatcgttaaagttccaccacattttgaggttcagccaaaagaccaggacggc
atatatgggaaatcagttaccttgaattgttcggcaaagggaaatccaatccccactata
gtgtggaaccactcaaaaggtgctggcgttcctcagttccagcccattgccttgaattct
ggctcccgcgtccagctcctggagaacggctctctgctcataaaacacgtcctggaggaa
gatgctggattttatctgtgcaaggtcagcaatgacgtgggagccgatatcagcaagagc
atgtacctcaccgttaaaattcctgccatgatcacatcttaccccaacaccacacgggca
gaacagggtcacatgactgagatgagctgcactgctcacggtgaaaagcccatcaaggtt
cgctgggagaaggaatctcatatcatcaacccagacatgagccgttatgtggttactgtg
aaggaagtgggggatgaggtcatatccaccctgcagatcttacacactgtcagagaggat
tctggctttttctcttgcatcgccattaactcttatggtgaagataaaggaatcattcag
ctcatagttcaagatcgtcctgaccctcctgaggttgagatcagagaagtaaaggaccgg
accatcgcacttcgctggaccatgggctttgatggcaacagccccattacaggatacgac
atcaactataaaaacaaatcagcttcctgggcctcatcacaaatgaccaaagacgtctcc
cctcagctgaatcaggccaccatcattgagcttcaccctgcttccacctacaacatccgc
atgttcgccaaaaaccagatcggagaaagcagaccgagcaacgagctgaccatcaccact
gacgaagcaccacccgacggagctcctcaagacgtgcagctggaagcgatctcatcccag
ggcatcaaagtcacatggaagcccccccacaaacacttgcaaaatggcttgatccgaagc
taccaagtgtgctatcgggagttcgggacaggaggcagcccacaatacaacaccatcaac
gtcgacaccacgggagacattgaaaccctcactcttgataacctgaagaagtacacgcag
tatgaggtgcgggtgcaagcagccaatcgagcaggaatggggccaacctcagaggaaatc
accatcaccacgctagaggatgttcccagtcgcccacctgaaaacgttgtgaccacagct
acgacccctgagaccatctctctgtcatggtctgcactgcccaaagaagccctcaacggc
atgctgctcggataccgtgtcatcttctgggccaacctacctgatggagagctgggagag
atcaggaacatcactaccaccaagccttcgctggagttggagcggctggaaaaatacacc
aactacagtatccaggtgctggccttcactcgagctggagatggagttcgtagtgagcag
atctacacacgtaccaaagaggatgttcctggccctccggctggagttaaggctgctgct
tccacaagctcggtggtgtttgtttcctggctgccaccacacaagctcaacgggatcatc
aggaaatacatcgtcttctgttccaacccttaccccacggtgattagtgagtttgaagcc
gcacctgatgtttatttccgtcgcttgaccaacttgaaccagaattggcagtacagcatc
tgggttgtggcggtgactgcggcaggtcgtgggaataccagtgaaattatcaccgtagag
ccccaagctaaagcccctgctcgaatcctgacattcagtggcactgtgaccactccctgg
atgagggacattgtccttccatgcaaagcagtcggagacccccctccaacaatcaaatgg
ctgaagggaaataatggtacacctgctccagtttcaatcgatggtcgtcgcagcgctcac
aacaatggcagctttgttattcgtaccgtcaaagcagaggattctgggtattacagatgt
gttgccagcaacaactggggttccgatgagatcatgctaaatcttcaggtccaagtacca
ccggaccaaccacgtcttaccgtgaccaaaaccacgaccacctccatcacgctcttctgg
atccccggagacaatggcggaagctccatcagaggctacattttacagtactcagaggat
aacagtgaagaatggggcagttactccatcagccccagtgagcgctcttaccgtctggag
aatctgaagtgcggtacttggtacaagtttactctgactgcacagaatgcagtaggtccc
ggacgcatcagtgaaatcattgaggccaaaacccatggaaaagaaccacagttcgccaaa
gaccacgagcttttctcaagtatcaactctacccgcgtggagctcaacctcattggttgg
aacaacggtggctgtccaattgactccttcacactagaatatcggccggtagacactacc
aagtggactatggtaaagcgggattccctcaccaagagccacattctgtacgacctacag
gaggccacctggtatgagctccagatgagagtcggcaacagtgcaggaacagcggagaag
agggtgctgttcgctactctgaatatggatggcagcacaattgctccattgccaaagagc
gtggaccccagccaggagaacaggcagggaaatgaaggacttaagatgatggtcacgatc
atctgcattctggtggcaatctgcatggtcttcatcgttcttctagtattgaggaggagg
agaagagagcagagactcaagagattacgagatgctaagagcctagcggagatgctaatg
agtaaaaatgcacgtacacctgacaccgtgaacaagcagcagcagactctgcggatgcac
atcgatatcccacgtgctcagctactcatcgaggagagggacactatggagacaatcgat
gaccgctccacagtgctgttgacggacaatgactttggagaaacatctaaacagaagtcc
tcaaccgtcacccatacagtgcattaccagtctctatctcaggccactggaccactagta
gacgtgtctgatgctagacctggtacaaaccccactgcccgccgcacagctaaagcaggt
cctgccacacgcagtcgttatgccagccagtggaccctgaaccggccacatcctcccgtc
tcctcacacacactcactacggactggaggttgcccactccgcgcgccacaggctcggtg
gacaaagagagcgacagctacagtgtcagtccctctcaggacacagaccgcgctcgcagc
agtatggtgtctacagaaagcgcctcctccacttatgaggagctagcccgtgcctacgaa
cacgccaaaatggaggaacagctgcgacatgctaagttcacgatcacagaatgcttcata
tcggatacatcctctgaacagatgacggccggcacgaatgactacacagacagcctgaca
tccagcacgccgtcagagtcgggcatctgcagattcacagcctccccacccaaaccacag
gacgccagccgggtcatgaatatggccgtgcctaaagcacacagacccgcaggtgaactg
gtccatctccccccttacctacgcatggacttccttttgaaccggggagcggcctcttca
ggtcgggaggccacaggacagacttgtatggacccacagaagagccggattacaaagcgg
ccggcgttgcttgcccccaccccctccgagaccccctcttcagccctctcttcctccggg
ccccccagcagagaggcggtacagcagtggcagccgggaactgcctctacactgccacag
cgcgagccgggcgacctggcccaggccgccaaactcagcagctcccaggaatcgctgcta
gactccagaggacacctgaaacaaagcaacaacccctacgcaaagtcctacacacttgta
taa
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