Danio rerio (zebrafish): 393111
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Entry
393111 CDS
T01004
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A
KO
K07277
outer membrane protein insertion porin family
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
393111 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dre03029
]
393111 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dre02000
]
393111 (samm50)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
393111 (samm50)
Transporters [BR:
dre02000
]
Other transporters
Pores ion channels [TC:
1
]
393111 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
393111
NCBI-ProteinID:
NP_956436
ZFIN:
ZDB-GENE-040426-806
Ensembl:
ENSDARG00000045814
UniProt:
Q803G5
B2GSP6
LinkDB
All DBs
Position
25:20259884..20279192
Genome browser
AA seq
469 aa
AA seq
DB search
MGTVHARSLDPLPMQGPELGVQADDMDLGEPEREEKQEVLENKDVVVQHVHIDGLGRTKE
DILTYEIADVFHAKNLIDVMKKSHEARQKLLRLGIFRHVEVVIDTAEGADALPNGLDVTF
EVKELRRMTGSYNTMVGNNEGSMVLGIKLPNVLGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGHFERNFSLNLYKVTGQFPWSSLRETDRGVSAEISFPIWRTSHTLKWEGVWRELGCLAR
TASFAVREESGHSLKSSLAHAMVIDTRNSTILPRKGALLKINQELAGYTGGDVSFLKEDF
EIQLNKTLFWDSVLSTSLWGGMLLPLGEKASSIADRFYLGGPTSVRGFSMYSIGPQSEGD
YLGGEAYWAGGVHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLSKLAE
CIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgtacacgccaggagtctggaccctcttcctatgcaaggccctgagctgggg
gttcaggcagatgacatggatctgggggaaccagaacgtgaagagaagcaggaagttctt
gaaaataaagatgttgttgtacagcatgtgcacattgatggacttggacgaacaaaggaa
gatattttaacgtatgagatcgctgatgttttccatgccaaaaacttgatagatgtaatg
aaaaagtcccatgaggccagacagaaacttttacgtctggggattttcaggcatgtggaa
gtggtcatcgacactgctgaaggtgcagacgcgctgcccaacggcctggatgtgacattt
gaggtaaaggagctcagaagaatgacaggaagttacaacaccatggttgggaacaacgag
ggcagcatggtcctggggatcaaactgcccaatgtgcttggccgtgctgagaagctgacc
tttcagttctcttatgggacaaaggagacctcgtatggcctgtcattcttcaagccgcag
ccgggacactttgagcgcaacttttccctgaacttgtacaaagtgactggtcagtttccc
tggagctccctcagagaaacagacagaggagtctccgctgagatcagtttcccgatctgg
aggacgagtcacacactaaaatgggaaggagtttggcgagagctgggctgtttggcccga
acggcttctttcgcagtcagagaggagagcggacattcactgaagtcgtcactcgctcat
gcaatggtcatagacacacgcaactccaccatcctgccaagaaaaggtgccttattgaag
atcaaccaggagctggccggttacactggaggagacgtcagctttctgaaggaggacttt
gaaattcagctcaacaagactctgttctgggactcggttctcagcacctctctgtggggc
ggcatgttgttaccactgggtgaaaaggcctctagcattgctgacaggttttatttgggt
ggtcctaccagtgtgaggggctttagcatgtacagcatcggccctcagagcgaaggagat
tacctcggcggagaggcctattgggctgggggagttcacctgtacacgcctcttccattc
agacctgggcgaggtggattcggagatcttttcagaacacatttcttcctcaatgccgga
aacctgtgtaacctcaactacggggaagggccgcgggctcacctcagcaaactggccgag
tgcatccgctggtcgtatggagcaggtattgtgctgcgtctggggaacatcgctcgactg
gagctgaactactgcattcctatgggcgtccagagcggagacaggatatgtgacggagtg
cagtttggggccggaatccgcttcctgtga
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integrated database retrieval system
