Danio rerio (zebrafish): 393115
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Entry
393115 CDS
T01004
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
393115 (apex2)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
393115 (apex2)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
393115 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
393115
NCBI-ProteinID:
NP_956440
ZFIN:
ZDB-GENE-040426-835
Ensembl:
ENSDARG00000008472
UniProt:
Q803D4
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All DBs
Position
8:complement(24408899..24412978)
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AA seq
558 aa
AA seq
DB search
MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDAATPFLAEEGLTGLLSNQGAVIGCYGDQVELTSEELLALDNEGRAV
ITQHHFIGQDGLQKLTVINVYCPRADPDKPERKEFKLQFYRLLQCRAEAILSSGSHVIIL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENGNAADEPAEDFQESASG
GKFVDSFRYFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSNHSLVKTFFIGVDIMPEVE
GSDHCPVWAQLSCTLQSSPRCPPVCTRHMPEFIGRQQKLSRFLFKIPEKQNISNSSEKSL
PGSQDAGEIRENLNPVVQKQNVGKKRPTDREDTNAHKSKKSKTTKTESNAKGSLLAFFKP
KQTQLIPTKEKQIESCQDGPGTGSNSKICPSDLQNDMNVSKLLEMETENQDEVEGESTSM
DKPNDCKKGPCTGFWKAVLHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCARPQGH
ASNPQARCNFFAWVEKGK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtaacatggaacataaacgggatacgaacgtttaaaaacggtattaagaaa
atcctggattcatttgatgcggatattatttgcgtccaagaaaccaaagttacccgcgac
ctgctggatgagaaaacagcgattgtcgatggctacaattcatactttagttttagccga
ggacgaagtggatactcaggtgttgcgacctactgtaaagataccgctactccatttctg
gccgaggaaggattgacaggtctactatccaatcagggagaggttattggttgctatggt
gaccaggtagagctgaccagcgaggagcttctggctttggacaatgaaggaagggctgtc
attacccagcatcacttcattggtcaagatggacctcagaagctgaccgttattaatgtt
tactgtccccgagctgaccctgacaaacctgagagaaaagagttcaagcttcagttttac
agactcctccagtgcagagctgaagccatcttgagctcagggagtcatgtgatcatcctg
ggtgacgtgaacacctctcacagacccatagaccactgtgacccagatgatgtggataac
tttgaagataaccctgggagaaagtggctggatcaattcttgttccaaactgcagagaac
tctgaaaatggaaatgctgcagatgaacctgctgaggatttccaggaatcagcctctggc
ggcaagttcattgactcttttcgctatttccacccaaagcgctcgaatgccttcacatgt
tggtccacactcacgggcgcaaggcagaccaactatggcacacgcatcgactacatcttc
tccaaccactctctggtgaagacgttctttattggtgtggacataatgccagaggtggag
ggatctgatcactgtcctgtttgggcgcagctcagctgtacccttcagtctagcccaaga
tgtccaccagtgtgcacacgtcacatgccagagttcatcggcagacagcagaaactttca
cgcttcctagtcaaaattccagagaaacagaacatttctaacggctctgaaaaaagtctg
cctggatcacaggatgctggggaaatccgggaaaacctgaatcctgttgtacagaagcaa
aatgtaggaaagaagagacctacagacagagaagacacaaatgcacacaaatccaaaaaa
agcaagacaacaaaaaccgaaagtaatgctaaaggaagtcttttagctttcttcaagcct
aagcaaacacagctgatacctacaaaagagaaacaagcagaatcctgtcaggatggcccg
ggtactggtagcaactcaaaaatatgccccagtgatttgcagaatgatatgaatgtctct
aagctcctggagatggagactgaaaatcaagatgaagtggaaggagaatctacatccatg
gacaagccaaatgactgtaagaaagggccatgcactggtttttggaaatcggttttgcat
gggccacctcagccaccactttgtaaatcacacaacgagccttgtgtcttacggacggtg
aaaaaagcaggacctaatttaggccggcagttttttgtatgtgctcgtcctcagggtcac
gcctccaatcctcaggccaggtgtaatttttttgcatgggtagaaaaaggaaagtag
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