KEGG   Danio rerio (zebrafish): 393164
Entry
393164            CDS       T01004                                 
Symbol
chmp4ba
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
dre04144  Endocytosis
dre04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    393164 (chmp4ba)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    393164 (chmp4ba)
  09143 Cell growth and death
   04217 Necroptosis
    393164 (chmp4ba)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    393164 (chmp4ba)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    393164 (chmp4ba)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    393164 (chmp4ba)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   393164 (chmp4ba)
  Exosomal proteins of other body fluids (saliva and urine)
   393164 (chmp4ba)
  Exosomal proteins of colorectal cancer cells
   393164 (chmp4ba)
SSDB
Motif
Pfam: Snf7 Phage_TAC_15
Other DBs
NCBI-GeneID: 393164
NCBI-ProteinID: NP_956489
ZFIN: ZDB-GENE-040426-906
Ensembl: ENSDARG00000016255
UniProt: Q7ZVC4 B2GR99
LinkDB
Position
6:49901513..49920320
AA seq 220 aa
MSLFGKMFGSGGKGGKSASPQEAIQRLRETEEMLTKKQEFLEKKIEQELVTAKKNGTKNK
RAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDN
MDIDKVDELMQDIIEQQELAQEISDAISKPVGFGEEFDEDELLAELEELEQEELDKNLLE
IGDNVPLPNVPSTSLPSRPAKKKEEEDEDDMKDLEAWAAN
NT seq 663 nt   +upstreamnt  +downstreamnt
atgtctttgttcgggaagatgtttggtagcggtggcaaagggggtaaatctgcaagccct
caggaggcaatccagcgactgcgagaaactgaagaaatgttgaccaagaagcaggagttt
ctggagaagaagatcgagcaggagctcgtcacggccaagaaaaacggcacgaagaacaaa
agagcggcactacaggcgttgaagcgcaagaagcgctacgagaagcagttagctcagatt
gacggcactctttccaccattgagttccagcgggaggcgctagaaaacgcacacaccaac
accgaggtcatcaaaaacatgggctacgctgccaaggccatgaaggcggcacacgacaac
atggacatcgacaaagtggacgaacttatgcaggacatcatagaacagcaggagctggca
caagaaatttcagacgcaatctccaaacctgtcgggtttggagaggaatttgatgaggat
gagctgttagctgaactggaggaactggagcaggaagagttggacaagaaccttctggag
attggagataatgtaccactgccaaacgtgccctcaacgtctttaccatccagaccagca
aaaaagaaagaagaagaggacgaggatgacatgaaagacctggaggcttgggctgccaat
taa

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