Danio rerio (zebrafish): 393173
Help
Entry
393173 CDS
T01004
Symbol
rpap3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
393173 (rpap3)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
393173 (rpap3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_11
TPR_8
TPR_16
TPR_19
TPR_14
TPR_BSK1_C
TPR_12
TPR_9
Motif
Other DBs
NCBI-GeneID:
393173
NCBI-ProteinID:
XP_073801838
ZFIN:
ZDB-GENE-040426-928
Ensembl:
ENSDARG00000087962
LinkDB
All DBs
Position
4:1228483..1248524
Genome browser
AA seq
595 aa
AA seq
DB search
MSGNKALELQIQMRHNAEDLQSFMRDLDSWEDEIKQKDQQLRSENTGDTQKTLPPVRNKD
YKKTKKRAKRQTNSLKEQKETQRIKSYDYQTWDKFDVEKALESMDAEESPVQSNESDSEC
VNVDRDLALAEKEKGNQFFKDGRFDSAIECYTKAMDADPYNPVPPTNRATCFYRLKKFAV
AESDCNLAIALDSKYVKAYIRRAATRTALQKHREALEDYEMVLKLDPGNSEAQTEVQKLQ
QELNSSKQTEETEEKRESITEPTAEQQQRLQEQQRKQEAVMHKDRGNAYFKEGRYEVAVE
SYTRGMEADETNALLPANRAMAFLKLNRFAEAEQDCSAALALDPSYTKAFARRATARAAL
GKCRDARDDFEQVLKLEPGNKQAISEIEKLTAEMRSSLAPQEDTLRKTVQPIHKPEHLRS
TKPLRRMEIEEVGGAIAQTPLTSSPHHKIQKMEEKPDASCPAVARSAEDEVIPPPPCTSF
QLEADLRKISHNPQSTYSYLKQISPDSYPKIFQNSLESDVLNRILQTFHRCHTRPEEASL
LLDVLRNLASVKRFDMAVMFMSNTEKKMVQELFERIHNAGLTDSTVQDLQKKYGL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaataaagcgctggagctgcagattcagatgcgacacaacgctgaagatctg
cagagctttatgagggatctggacagctgggaggacgagatcaagcagaaagaccagcag
cttcgctctgaaaacactggcgatacgcagaaaacacttccacctgtgagaaacaaagac
tataagaagacgaagaagagggcgaagcggcaaactaacagcctgaaggagcaaaaagag
acgcagcggataaaatcctacgattatcagacctgggataaatttgatgtggaaaaggct
ctggagtccatggatgcggaggaaagcccggttcagtccaatgaatctgactctgaatgt
gttaacgtggaccgagatctggcgctcgctgagaaagaaaaggggaatcagttcttcaag
gatggccggtttgacagcgccatcgagtgttacaccaaagcgatggatgcggatccgtat
aatcccgttcctccaacaaacagagccacctgcttctacagactcaagaagtttgctgtg
gccgagtctgactgcaatttagccatcgctctggacagtaaatatgtgaaggcgtacatc
aggagagcagcgacgcgcacggctttacagaaacatcgggaagctctcgaagattatgaa
atggttctcaaactggatcctggaaactcagaggctcagactgaagtgcagaagctgcag
caggagctgaactccagcaaacagacagaagagacagaagagaaaagagaaagcatcacg
gagccgacggcggaacaacagcagcgtctgcaggaacagcagaggaaacaggaagctgtc
atgcacaaggaccgaggaaatgcgtactttaaagagggccggtacgaggtggcggtggag
agctacactagaggaatggaggcggacgagacgaatgcactactgcctgctaacagagcc
atggccttcctcaaactcaacaggtttgcggaggcggagcaggactgcagtgcggctctc
gctctcgacccctcatacactaaagcgttcgccagacgagccacagccagagccgctctg
gggaagtgcagggacgccagagacgattttgagcaggttctgaagctcgagccgggaaac
aaacaagccataagtgagatcgagaagctcacagcggagatgcgcagcagtctggctcca
caggaggacacactgagaaagaccgtccagcccatacacaagcctgagcacctcagatcc
accaaacccttgaggcgaatggagattgaagaggttggaggagcgatcgctcagactccg
ctcacgtcttcacctcatcataagatccagaagatggaggagaagccagacgccagctgt
cctgctgtggccaggtctgctgaggacgaggtcattcctcctccaccctgcaccagtttc
cagctagaggccgacctgaggaagatcagccataacccacagtccacatacagctatctg
aagcaaatcagtccagactcgtatccaaagatcttccagaactctctggagtccgacgtg
ctgaaccgcatcctgcagaccttccaccgctgccacacacgacctgaggaagcgtctctt
ctgctggacgtcctgagaaacctggcgagcgtgaagagattcgacatggccgtcatgttt
atgtcaaacacggagaagaaaatggtgcaggagctgtttgaacggattcacaatgccggt
ctgacagactccacagttcaagacttacagaagaaatacggcctctga
DBGET
integrated database retrieval system
