Danio rerio (zebrafish): 393180
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Entry
393180 CDS
T01004
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2
KO
K15516
fragile X mental retardation protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
393180 (fxr2)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
393180 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
393180 (fxr2)
mRNA cycle factors
Stress granule specific factors
393180 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
393180
NCBI-ProteinID:
NP_956505
ZFIN:
ZDB-GENE-040426-943
Ensembl:
ENSDARG00000016260
UniProt:
Q6NY99
LinkDB
All DBs
Position
7:22718732..22761090
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AA seq
676 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPTDYHKDIC
EGDEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTSERIRPVNPNSP
SAQNSFYKVPIAVPEDLRDICLTENIHKDFRKAIGANCIFYNTSTHQLIVLSTNESTVKR
AGLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKQARTYLEFKEDSFPVPRNLVGKVIGKN
GKIIQEIVDKSGVVRVRIEGDNDKKLPREEGGRQGAGRDNIVSSQEGTVPFIFVGTKENI
SNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRSGSGVAGERERGYLTD
ESTNSLQTTRTYGGRGRGRKPNNTYSGYGTNSEMSNASETEDLGDRESRPKGVGADDRGS
KRGGRGRGSSAGRGRGGPGPRNINTISSVLRDPDSNPYSLLEGEGEQGGDTDASESMGGI
DRRRRSRRRRNDLEPSLMDAAANESDGQGATSENGLEEEGRPQRRNRSRRRRNRANRPEG
GSTSRDRQPVTVADFISRAESQSRQNLPGKEANPHVSHPKENGTSVSKEERTPSKRSPSN
GVASPGEALAMVNGVS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttggcggtggaggtgcgcggctccaacggggccttctacaagggtttcatc
aaagatgtacacgaagactccctcacaatagtctttgaaaacaactggcaaccagagaga
cagctgccgttcagtgacgtgaggttgccgcccccaaccgattaccacaaggacatttgt
gagggagatgaggtggaggtttactccagagccaatgagcaggagccctgcggctggtgg
ctagcgagggtgaggatgatgaagggagagttctatgtgatcgagtatgcagcctgcgac
gccacatacaatgaaattgtcacatcagagcgaatccggcctgtcaatcccaacagcccc
tcggctcaaaactccttctacaaagtccccatcgctgtaccagaggatctcagagacatc
tgtttgaccgaaaatatccacaaagacttcaggaaagctatcggagcaaattgcatcttc
tataacacctctacacaccaactaattgtcctgtctacaaatgagtccacagtgaaacga
gctgggctactgagtgacatgcacttccggagtattcgcaccaaactcatgctgatgtcc
cgcaacgaggaggccaccaaacacttagagacaagtaaacagctggcgtctgcgtatcag
gaggaagtgaaggtgcgcgaggatctaatgggtctggctattggctcgcatggcgccaac
atccagcaggcccgcaaggttcccggtgtcaccgccatcgagctggaagaagagagctgc
acatttcgcatctatggagagaccccagaggcagtcaaacaggccagaacgtatctggag
tttaaagaggattctttcccagtgccaaggaatctagtaggaaaagttattggcaaaaat
ggcaaaattatccaggaaatagtcgacaaatcgggtgtggttcgggttcggattgaaggg
gacaatgataaaaagctgcccagggaggagggaggcaggcagggggctggcagagacaac
attgtcagcagccaagagggaacggttccctttatctttgttggaactaaagagaacatc
agcaatgcccaggccttgcttgaataccatgtagcctacctccaggaggtggagcagctg
cgtctggagcgtctgcagatcgatgagcagcttcgtcagatcggtgttggatatcgagct
cccccaagtcgctctggttcaggtgttgcgggtgagcgggagcgaggttacctcacagac
gagagcaccaactccctgcagaccacacgcacatatggaggaagaggacgcggacgcaaa
ccgaacaatacatactccggctatggaactaactctgagatgtccaatgcatcagagaca
gaggatttgggggatcgggagtccaggcctaaaggggttggagcagatgatcggggttcg
aagcgtggaggtcgaggccgtggctccagcgctggcaggggccgtggaggaccaggaccc
agaaacattaacactatcagctcagtcctccgagatccggacagtaacccatactctctg
ctggagggtgaaggtgaacagggcggtgatacagatgctagcgagagcatgggtggtatt
gaccgcagaagacgctcacgtcgccgccgtaatgacctggaaccaagccttatggatgca
gccgctaatgaatcagacggtcagggtgccacaagcgaaaatggactggaagaggagggc
aggcctcagcgccgcaatcgaagccgccgccgccgtaatcgtgccaaccgtcctgaagga
ggctccaccagccgtgaccgacagccagttactgttgctgacttcatctctcgtgccgag
tcccagagcagacagaatctcccggggaaggaggccaacccacacgtgtcccatcctaag
gaaaacgggaccagcgtgagtaaggaagagcgcactccttcaaagcgctcgcccagtaac
ggcgtggcgtcgcccggtgaggctctggccatggtgaacggcgtctcctaa
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integrated database retrieval system
