KEGG   Danio rerio (zebrafish): 393196
Entry
393196            CDS       T01004                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03030  DNA replication
dre03420  Nucleotide excision repair
dre03430  Mismatch repair
dre03440  Homologous recombination
dre03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    393196 (rpa3)
   03420 Nucleotide excision repair
    393196 (rpa3)
   03430 Mismatch repair
    393196 (rpa3)
   03440 Homologous recombination
    393196 (rpa3)
   03460 Fanconi anemia pathway
    393196 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dre03032]
    393196 (rpa3)
   03400 DNA repair and recombination proteins [BR:dre03400]
    393196 (rpa3)
DNA replication proteins [BR:dre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    393196 (rpa3)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     393196 (rpa3)
   MMR (mismatch excision repair)
     393196 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     393196 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 393196
NCBI-ProteinID: NP_956521
ZFIN: ZDB-GENE-040426-977
Ensembl: ENSDARG00000002613
UniProt: Q7ZUZ6
LinkDB
Position
19:25465063..25467089
AA seq 121 aa
MTGVYESPKTRINTSMLSQYISRPVCFVGRLEKVHPSGKVLTLVDGEGKSASVELNEPLD
EELSGIVEIIGTLSNKGAIMATSYTQYREDKVPFDLELYNEGLKVLHDFPQHYPFEVSMS
G
NT seq 366 nt   +upstreamnt  +downstreamnt
atgacgggcgtttatgagtctccgaaaacccggatcaacacgtcgatgctgtctcagtat
atcagtcgaccagtctgcttcgttggacgcttggagaaggtacatccatcaggaaaggtt
cttacactggtagatggtgaaggaaagtcagcgtcagtggagctcaatgaacccctggac
gaagagctgagtgggattgtggagattattggaacgttgtccaacaaaggagcaatcatg
gctacttcgtatactcagtatcgagaagacaaagtcccgtttgatttggagctgtacaat
gaaggtctgaaagttcttcatgattttcctcagcattacccatttgaagtgtcaatgagt
ggttaa

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