Danio rerio (zebrafish): 393202
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Entry
393202 CDS
T01004
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha B
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
dre04140
Autophagy - animal
dre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
393202 (hif1ab)
04137 Mitophagy - animal
393202 (hif1ab)
04148 Efferocytosis
393202 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
393202 (hif1ab)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
393202 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
393202
NCBI-ProteinID:
NP_001296971
ZFIN:
ZDB-GENE-040426-706
Ensembl:
ENSDARG00000034293
UniProt:
Q6EHI4
LinkDB
All DBs
Position
20:complement(22868898..22897866)
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AA seq
777 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLNSDEKEEKEENELESQLNGFYLKALEGFLMVLSEDGDMVYLSENVSKS
MGLTQFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCAGHVRVHEGSEASEDSGFKEPPVTYLVLICEPIPHPSNIEVPLDSK
TFLSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQA
TTGQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTVTE
PKAVEKESEETEEKTSELDILKLFKPESLNCSLESSTLYNKLKEEPEALTVLAPAAGDAI
ISLDFNNSDSDIQLLKEVPLYNDVMLPSSSEKLPLSLSPLTPSDSIPALTKLETGGEDFP
FSSASDRVPDPTNTPSTSGLGSSGPNSPMDYGFPVEPDISSEFKLDLVEKLFAIDTEAKT
PFSTQPMEDLDLEMLAPYIPMDDDFQLRIPSPLDPLPSATHSVSAMSSLFQPLPSSPASP
ASSTSSTVKQEASSRAPSPLHLLQEVCSAPVSPFSGSRDASPVRSSTPQSSSQLNNREMS
PKMLAFQNIQRKRKLNEVTSLSEAVGLGALLHSVDSAIDPGKRAKVLEVKGSSVLGGNKT
ILILPSDVASRLLSSSLEGSGGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcgcgatctcgcaggggaaaggagtctgaggtgttctacgagttagca
caccagctccccctgccacacaatgtcacgtctcacctggacaaagcctccattatgagg
ctcaccatcagctacctgcgcatgaggaagctgctcaattccgatgaaaaagaggagaag
gaggagaatgagctggaaagtcagctgaatggcttttatctgaaggcccttgagggtttc
cttatggtcctgtctgaggatggagacatggtttatctctctgagaatgtcagcaagagc
atgggcctcacacagtttgatctgaccggtcacagcatctttgaattttcacacccatgt
gaccatgaagagttgagagagatgctcgtccacagaacaggatccaaaaagaccaaggaa
caaaacacagagcgtagcttcttcctgcggatgaagtgcacactcactagcagaggacgc
accgtcaatatcaagtctgcgacgtggaaggttcttcactgcgctggtcatgttcgtgtg
cacgagggcagcgaggcttcagaagactctggctttaaagagccccctgtcacttacctt
gtgctcatctgtgagcccattcctcatccctcgaacatcgaggtgccattggacagcaag
accttcctcagccgccacactctggacatgaagttctcatactgtgatgaaaggatcact
gagctgatgggatatgagccagatgacctcttgaacagatcagtctacgagtactatcac
gcccttgattcagatcacctcaccaagacacatcacaacctgtttgcaaagggccaggcc
accacaggccagtaccgcatgctggctaagaaaggtggttttgtgtgggttgagactcag
gccactgtaatctacaaccccaagaattctcagccgcaatgcattgtgtgcgtcaactac
gttctcagtggcattgtagagggggatgtagtcctgtccttgcagcagaccgtgactgag
cccaaggctgttgagaaagaaagtgaggagactgaggaaaagacctctgaattggatatt
ctcaagctcttcaagccagaaagcctcaattgctcattggaaagctctacactttataat
aagctgaaagaggagccagaggccctcactgtgttggcacctgcagcaggcgacgccatt
atctctctggacttcaacaactcagattctgacatacagctgctgaaggaggtgcccctc
tacaatgatgtcatgctgccttccagcagtgagaagctgccactcagcctatctcctctc
acacccagcgactccatcccagctctgaccaaactagagactggaggagaggacttccct
ttcagctctgcctctgatcgtgtgccagaccccacaaacacaccctccacatctggactc
ggctcttcggggcccaacagccccatggattacggtttcccagtggaaccagacatcagt
tctgaatttaaactcgacctggttgagaaactgtttgctattgataccgaagcaaagaca
cctttttccacccagcccatggaggatctcgacctagagatgctggctccttacatccca
atggatgacgacttccagctgcgcatcccatctccactggatccgctcccatctgccact
cactctgtgtcagccatgagctctttattccaacccttaccctcctcgccagcatctcca
gcctcatctaccagcagcacagtgaagcaggaggcgtcatcccgggccccttcaccccta
cacctgctgcaggaggtgtgcagtgcacctgtctcgcccttcagtggcagtcgggatgcc
tcacctgttcgatccagcaccccacagagcagcagtcagctcaacaacagagaaatgtct
ccaaagatgttagccttccaaaatatccagcgtaagaggaagctaaacgaagtgacgtcg
ctttctgaagctgttggactgggggctttgcttcacagtgtggacagtgctatagaccct
ggaaagagagcgaaggttttagaggtgaaagggtccagtgtgctcgggggaaacaaaaca
attctcatactgccctctgatgtggccagtcgtctgttgagcagttctctagagggcagc
ggcggcctccctcagctcacacgctacgactgcgaagtcaacgctcccgtgcaggaccgc
caccatctgctccagggagaggagctgctgcgtgctctggaccaagtcaactga
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