KEGG   Danio rerio (zebrafish): 393253
Entry
393253            CDS       T01004                                 
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
  KO
K10567  endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    393253 (neil1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    393253 (neil1)
Enzymes [BR:dre01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     393253 (neil1)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     393253 (neil1)
SSDB
Motif
Pfam: Neil1-DNA_bind Fapy_DNA_glyco H2TH
Other DBs
NCBI-GeneID: 393253
NCBI-ProteinID: NP_956577
ZFIN: ZDB-GENE-040426-994
Ensembl: ENSDARG00000018061
UniProt: Q6TGW9
LinkDB
Position
25:complement(29172613..29178595)
AA seq 438 aa
MPEGPELHLASLFVNRMCEGVVFTGAVEKSEVNKNPEVPFCCDAYCIKAQSRGKEVRLTL
TPIKNDASSKRKIDERQSQQPMNVVFRFGMSGFFRFTSVDELPKHAHLRFYTNETPHRVL
SFEDTRRFGSWQPNGSWQKNRGPCIMFEYESFRENVLSNLSDKAFDKPICEALLNQKYFN
GIGNYLRAEILFRLQIPPFEKARTVLEGLELKDEDKKKVKKEISVAETTDTTAKKEIKTE
TPDLLSLCHTVPWEVVNLGGKGYAPAKGEYSVLQAWMRCYSVDGMNSLNDHNGRTIWFKG
DPGPLVPKGAKSRRIVWKTQKGGHDYTDSKKAKRTQTDSIKKEKSDKKMGNIKVQRKKES
STKSGLKRQEKVTRISKSEPADKKKKPNEGEKRKSQKVPVKTGSNRIKGRCVKEVNKKNS
TTCRKSKTKAKSQSRDTK
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgccagaaggtcctgagctgcatttagcaagcctgtttgtcaacaggatgtgtgaaggg
gttgtgtttactggagccgtagagaaatctgaagtaaataaaaatcctgaggtcccattt
tgttgtgacgcctactgcatcaaagcacagtccagaggaaaagaagtcagacttacactc
acgcccattaaaaatgacgcaagcagtaaacgaaagattgatgaacggcagtcccagcag
ccaatgaatgtggtttttcgatttgggatgtcaggatttttccgcttcacttcagtagac
gaacttccgaaacatgcccacctgcggttctacactaatgagactccacacagggttctg
agctttgaggatacccgcagatttggcagttggcaaccaaatgggagctggcaaaaaaac
agaggcccttgcatcatgtttgagtatgagagcttcagggagaatgttctttctaatcta
tctgacaaggcatttgacaaacccatctgtgaagctctcctaaatcagaagtatttcaat
ggaattgggaactatcttcgagcagagatcttgttcagattacaaatccctccatttgag
aaggcacgaacagttctagaaggacttgagctgaaagacgaagataaaaagaaggtcaaa
aaggagatttcagttgcagagactacagacacaactgcgaagaaggagattaagactgag
accccagacctcctttcgttatgtcacactgttccttgggaagtagtgaatttgggagga
aagggttatgcccctgcaaagggggagtattctgttctacaggcctggatgaggtgttac
tctgtggatggaatgaactcattaaatgaccacaatggacggacaatttggttcaaagga
gatcctggtcctttggtgcctaaaggtgccaaatcccgcagaattgtgtggaaaacacag
aaaggtggtcatgattacactgattcaaagaaagccaaaaggacacaaactgacagcatt
aaaaaagaaaagtcagacaagaaaatgggcaacataaaagtacagagaaaaaaagaaagc
tccacaaaaagtggattaaaaaggcaggagaaagtcacaagaatttccaagtcagaacct
gcagacaagaagaaaaagccgaacgaaggagaaaagagaaagtctcagaaagttcctgta
aagactggaagtaacagaataaaaggcagatgtgtaaaggaagtgaataaaaagaattct
accacctgcaggaaaagcaaaacaaaagcaaaatcacaaagtcgtgacacaaaatga

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