Danio rerio (zebrafish): 393283
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Entry
393283 CDS
T01004
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
393283 (chd1l)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
393283 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
393283
NCBI-ProteinID:
NP_956607
ZFIN:
ZDB-GENE-040426-892
Ensembl:
ENSDARG00000015471
UniProt:
Q7ZU90
LinkDB
All DBs
Position
6:36844147..36877587
Genome browser
AA seq
1026 aa
AA seq
DB search
MSTFLRAVRDNIPEKDKSELTENDLKKWGLGAIHLRPYQLDGVKWLSLCMKNQQGCILGD
EMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKE
KRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLK
EFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELH
QVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRL
LNVLMQLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFIFLLSTKAGGVGMNLT
AADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTD
TVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSVQDVDLQLILGQSRDGQWL
TDEEHAKLNESNEEEDEDMEGQNHMYYFEGKDYSKDPSAEDEKTFELLLEKQFAEMEDAE
KEGRALRNKAGVSLSGPLINPARKKRPLTEAELEERRQKRQAAAAKRAKLQEERKKQQEE
LNYKKKMAWWDSCGYRSLCLPRVDSEGEDMEPDEDDHVSFSSTDSDHTAIRYVLGDVTHP
QADREDAIIVHCVDDSGHWGRGGLFTALGLRSDEPRKQYELAGDMKDLELGNVLLFPVDD
KQSRLCGRDYLALIVAQQRDKANKLSGIRLTALDEGLKKIYKAAKQKKASVHLPRIGHST
KGFNWYGTERLIRKHLATRGIFTSIYYYRRGSSHATVSSTASTTTPSSSKPAASSPSESP
HSSSPPANREGLTKSAELSTTSHEGPGAPGLADFMRGVHVYFYNMAATEKKKLTRYLITY
DGDEEDLMSSHVTHIVGEVESPVHKQELQDLLHQYPQALLVKKNWLESCFASQRKVSVSK
YVIRLT
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatttcttcgagcagtcagagacaacataccagaaaaggacaaatctgaacta
acggagaatgacctgaagaaatggggacttggagctattcatctgaggccttatcagctg
gatggagtgaagtggctgtcactgtgtatgaagaaccagcagggctgcatcctcggtgat
gagatgggtctgggcaagacctgtcagaccatctctttgctggcgtatgctcgaggaagc
cttaagatgaacgggccgttccttgtgctttgtcccttggctgttttggagaactggagg
caagagttggaacgtttctgccctagtctgtctgtgatctgttacactggggataaagag
aagagggcagagctccagcaaaacctcaagagtgacccacggtttcatgttcttctcacc
acctatgagatgtgccttaaggatgcccgctacctaaaaagctggaaatggaagatttta
gttgtggatgaggctcaccgcctcaagaaccaggagtcattgcttcaccaaaccctcaaa
gagtttacagtgggatttcgagtgctactgacaggcacccccattcagaataacttacaa
gaagtctattccctcctcaccttcatccagcccagtgtgtttctccctgaagctgttgag
gactttgtcaatgcctacgcagacatacagactgaacctgctcttgtcgatgagcttcat
caagtgctccagccgtttttgctgcgcagggttaaggcagaagtggcggccgaactgcct
aagaagacagagcttgtggtttttcatgggctgtctgctcttcagaagagatactataaa
gccattctgatgagagaccttgatgcctttaggaccgatcaaagcacgaagacccgactt
ctgaatgttttaatgcagctcaggaaatgtgtggaccatccctacttgttcgatggagtg
gagccagaaccgtttgagatgggggagcatttagtggaggccagtggaaagctttctttg
ctggacagcatgctggcgtatcttcaggagggaggccaccatgttcttctgttctctcag
atgaccaggatgctggatattctgcaagattacttggagtacagaggttacagttatgag
cgtctggatggttcagtccgtggagaggagcgtaaccttgctatcaaaaacttcagcacc
aaagatgtttttatttttctcctcagcactaaagctggaggggtcggcatgaacctcact
gcagcagacactgtgatatttgtggatggtgatttcaacccacagaatgacctccaagca
gcagccagagcacaccggattggtcaaacaaggcctgttaaagtgatccgactccttggt
agagataccatagaagagatcatctattcccgcgctgtgtctaagctgcgtctcacagac
accgtgatcgaggaaggacggttttctcttttggaccaggctcagtctgcagcttctggc
cttcagttatctgagatcctgaagtttggtgttgataagctgctgtcatcagaggagagc
tccgttcaagatgtggacctccagctgattctgggtcaatctcgagacgggcagtggctg
acggacgaagagcacgccaagcttaatgagagcaacgaagaggaagatgaggacatggag
ggtcaaaaccacatgtattactttgaggggaaagactactctaaagatcccagcgcagag
gatgagaagacctttgaactgttacttgaaaagcagtttgctgagatggaggatgctgag
aaggaaggccgcgcacttcgcaacaaagccggggtgtccctgtctggtcccttgatcaac
ccagcgaggaagaagagacctctaacagaagcagagttagaagaaagacgtcagaagaga
caagcagctgctgcaaagagggcgaagctacaggaagaaaggaagaagcaacaggaagaa
ctaaattacaagaaaaagatggcatggtgggactcatgtggctacagatcactgtgtttg
ccacgcgtcgatagtgagggtgaagatatggagcctgatgaagatgatcacgtcagcttt
agctccaccgattcagatcacacagccattcgatatgtgctgggtgatgtaactcatcct
caagccgatcgagaggatgccatcattgtgcattgtgttgatgactctggacactggggc
cggggaggattatttactgcactggggctcagatcagacgagccgaggaagcagtacgag
ttggccggcgacatgaaagacctagagctgggaaatgttctgctttttcccgttgatgac
aaacagtcgaggctctgtggaagagattacctggctctcatagttgcccagcagagggat
aaagccaacaagttgtcaggcattcggctcactgccttggatgaaggcctcaagaagatc
tacaaagctgccaaacaaaagaaggcaagtgtccatctgcctcggattggtcattccact
aaaggcttcaactggtacggtacagagagactcattcgcaagcacctggccaccagagga
atcttcacatccatttactactacagacgaggatcttcacacgctacagtgtcttccact
gctagcaccaccactccatcaagctcaaagcctgcagcatcctcaccatctgagtcccca
cactcctccagtcctccggctaacagagaaggtctaacaaagtcagcagaactctccact
acatcacatgaaggtccgggggctccagggttggctgacttcatgagaggcgttcatgtc
tacttttataacatggctgctacagagaagaagaaactaacccgctaccttatcacatat
gatggtgacgaagaggatctcatgagctcacatgtcactcatattgtaggagaggtagaa
agtccagtccataaacaggagctccaagatctattgcatcagtaccctcaggccctcctt
gtaaagaaaaactggctggagtcttgctttgccagccaaaggaaagtcagtgtgtctaaa
tatgtaattaggttgacttga
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integrated database retrieval system
