Danio rerio (zebrafish): 393351
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Entry
393351 CDS
T01004
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
KO
K12198
charged multivesicular body protein 5
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
dre04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
393351 (chmp5b)
09143 Cell growth and death
04217 Necroptosis
393351 (chmp5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
393351 (chmp5b)
Membrane trafficking [BR:
dre04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
393351 (chmp5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
NPV_P10
PIBF1
Big_3_3
Histone_HNS_N
Alpha-E
Hydantoinase_B
GrpE
DUF848
DUF948
RUBC_PIKBD
Motif
Other DBs
NCBI-GeneID:
393351
NCBI-ProteinID:
NP_956674
ZFIN:
ZDB-GENE-040426-1374
Ensembl:
ENSDARG00000103718
UniProt:
Q7T339
LinkDB
All DBs
Position
7:complement(60132801..60140534)
Genome browser
AA seq
220 aa
AA seq
DB search
MNRIFGRGKPKGPPPNLTDCISGVDSRAESVDKKIARLDAELMKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAY
KNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTPEIDEDDLEAELDALGDELLLDDDN
SYLDEASSAPAIPEGAPGDRTTNRDGVLVDEFGLPQIPAT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtatcttcggacgaggaaaacccaaaggaccaccgccgaacctcacggactgt
atatcaggtgttgactctcgagcagagtcggtcgataagaaaatagccaggcttgatgcc
gaactgatgaaatacaaagaccagatgaagaaaatgagggacggcccatcaaagaatatg
gtgaaacagaaagcaatgcgagtcctcaaacagaagagaatgtatgaagggcagagagac
cagttgatgcagcagtcatttaacatggaacaagcaaactacactatccagacgctaaaa
gacaccaagaccacggtggaggcaatgaaaatcggtgccaaagaaatgaaaaaagcatac
aagaatgttaaaattgatcagatcgaggatctgcaagaccagttggaggacatgatggaa
gatgctaatgaagtccaagaagctcttagtcgcagctatgggacaccagaaattgatgaa
gatgacttggaagcagagctggatgcactgggtgacgaactccttttggatgatgacaat
tcctatctggacgaagcgtcttcggctccagctatacctgagggagcaccaggagacaga
accactaaccgggatggagtactggtggatgagtttggcctacctcaaattccagctaca
taa
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