Danio rerio (zebrafish): 393362
Help
Entry
393362 CDS
T01004
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04136
Autophagy - other
dre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
393362 (wipi1)
04136 Autophagy - other
393362 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
393362 (wipi1)
03029 Mitochondrial biogenesis [BR:
dre03029
]
393362 (wipi1)
Membrane trafficking [BR:
dre04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
393362 (wipi1)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
393362 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_Vps41
EIF3I
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
393362
NCBI-ProteinID:
NP_956685
ZFIN:
ZDB-GENE-040426-1404
Ensembl:
ENSDARG00000040657
UniProt:
Q7T305
LinkDB
All DBs
Position
3:36284981..36306403
Genome browser
AA seq
453 aa
AA seq
DB search
METEEGADGPGGPGPGLGLCCASFNQDSTSLAVGTKTGYRLFSVTSVDKLDCIHESAETP
EVYIVERLFSSSLVVVVSQSMPRRMNVYHFKKGTEICNYSYSNNILAVRLNRQRLVVCLE
ESIYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSFLAYPGSDTIGEIIVYDANNLST
VTMIPAHDSPLAAITFSASGTKLASASERGTVIRVFSIPEGLRLFEFRRGMKRYVNISSL
SFSPDAQFLCASSNTETVHIFKLEQHSPSGEEEAPSWSAYVGKMFTAASSYLPAQVSGMM
SQDRAFTTVRLQMAGQRNVCALATIQKLPRLLVASSDGQLFIYNIDPQDGGECTLVQKHR
LFGSDKEWEETNQSDMTEAPQACQSYAATVAIPTSGPVTATLTGYSEDGGAKKGEVIPEH
EFAAGPVCLDDETEFPPINWCRDGSGRGKGRRP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaggagggagccgacggtcctggcgggccggggccggggctggggctgtgc
tgcgcctccttcaaccaggactccacgtctttggctgtgggcaccaaaactggatacagg
cttttctctgtgacctcggtggacaaactggactgcattcatgagagcgcagaaactcca
gaagtgtacatcgtggaaaggcttttctccagcagcctggttgtggtggtgagtcagtcc
atgccacgtcgcatgaacgtctaccacttcaaaaagggcaccgagatctgcaactacagc
tactcaaacaacattcttgcagtgcgtctcaacagacagagattggttgtctgtctggag
gaatccatctatatccacaatataaaggacatgaaactcttgaagacgcttctcaacaca
ccgtccaacccatcaggtctctgtgctctctccatcaaccattccaactctttcctggca
tatcctggcagtgataccatcggagaaattattgtctatgatgccaacaatctgagcact
gtgaccatgattccagctcatgacagtccactggccgccatcaccttcagtgcctctggc
accaaactggccagtgcttctgaaaggggcacagtgattcgagtcttctccatcccagag
ggactgcgcctgtttgagttcagaagagggatgaaaaggtatgtcaacatcagctccctt
tccttcagcccggatgctcagttcctgtgtgcctcaagcaatacagagacggtgcacatt
ttcaagcttgaacaacacagcccaagtggggaggaggaagctccctcttggtccgcatat
gtaggtaagatgttcaccgccgccagcagctacctccccgcacaggtgtcaggcatgatg
agtcaagaccgagccttcactaccgtccgtctccagatggctggtcagagaaatgtctgc
gccctggcaacaatccagaagcttccacgtttacttgtggcctcctctgatgggcagcta
ttcatttataacattgatccgcaagatgggggtgagtgcacgctggtgcagaagcacagg
ttgtttggatcagataaagagtgggaagagactaatcaatctgacatgacagaggctcca
caagcgtgccagtcctatgctgcgactgtggccattcccacatctggaccagtcacagcc
actctcacaggttactcggaggacggcggagctaagaaaggcgaggtgattcctgaacac
gagttcgcagcagggcccgtgtgcctggacgacgagaccgaatttcctcccataaattgg
tgccgagacggatctggccgaggcaaagggcgacgaccgtga
DBGET
integrated database retrieval system
