Danio rerio (zebrafish): 393376
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Entry
393376 CDS
T01004
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04137
Mitophagy - animal
dre04140
Autophagy - animal
dre04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
393376 (hif1al)
04137 Mitophagy - animal
393376 (hif1al)
04148 Efferocytosis
393376 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
393376 (hif1al)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
393376 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
393376
NCBI-ProteinID:
NP_956699
ZFIN:
ZDB-GENE-040426-1315
Ensembl:
ENSDARG00000100826
UniProt:
Q7T2E4
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Position
15:complement(25503955..25527554)
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AA seq
571 aa
AA seq
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MRVTLSYLRMNRLIQSGSTKSQTEKSETPTDGFYQQALAGFILVMTEEGDMVFLSESVSK
YIGITQLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTMEHNFFLRMKSTLTHTGRT
VNIKSATWKVLHCTGHMQPFSGDDENSPSAGSFLTLLCEPIPHPSSVEFPLDSSTFLTRH
NLDLTYTQCDGRVTELVGYQPDDLIGRSAFEFFHALDFDHVSRSLHILFSKGQVCTGQYR
FLAKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEQDVVFSLEQTCEKPKPKVE
RLMVLKEEQEDSDMEESSTAKLFLQMKENPEELLQLAPHSGDAIISLTEGLELSFCCPQS
PNSVPECPQDFCTPELRKLLSPIFDGPAKSPPAASPAEELPMEMEGVEKFFALKPEESLT
PKGQSEAVDELDLDMLAPYISMDDDFQLTFLPQSEITPPLEMLTSNSRKRCLEDDDDDDI
PVLAARWDKKQMSGSIEDQLLLSHTLLDGLSDGSDEFEPPPQKRSQLLTDRDPLLGGVQA
LCDTAALMRDTFLSRPPDLRRPVAETLPSLT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgacactcagctatctgcgcatgaaccgcttgatccaatctgggtcgactaaa
tcacagactgaaaaatccgagactcccaccgatggcttttatcagcaggcattggctggc
tttatcctggtgatgacagaggaaggggacatggtcttcctctctgagagtgtcagcaaa
tacatcggcatcactcagctggagctgcttggtcagagtgtgtatgagtttgttcatccc
tgcgaccaagaagaattgcgagacatccttgccacaagaccaggtgtttcaaagaaaaag
acaatggaacataatttttttcttcgcatgaagagcacacttacccacacaggaagaacc
gttaacatcaagtctgcaacatggaaggtccttcattgcacaggacacatgcagcctttc
agcggtgatgatgaaaactcgccctctgctggaagcttcctgacattattgtgcgaaccc
atacctcacccatccagcgttgagtttccactcgacagcagcactttcctcacacgccac
aacttggacctgacttacacacagtgtgacggacgtgtcactgagcttgtcggatatcag
cctgatgatctgattggccgctctgcttttgagttttttcatgccttggattttgatcat
gtatccagaagcttacacatcttgttctccaagggtcaggtgtgtaccggccagtaccgt
tttcttgctaagaatggaggatttgtgtggactgagactcaagccactgtcctctacaac
agcaggacctctcagcctgaggcggtggtctgcctcaacttcattctcagtggtgtggaa
gagcaggacgtcgtgttctcattagagcagacatgtgagaaaccaaagcccaaagtggag
aggctgatggtgcttaaggaggagcaagaagactcggacatggaggagagcagcactgcc
aaactcttcctgcagatgaaggagaacccagaggagcttctgcagctggcacctcattct
ggagacgccatcatctccctgacagagggtttggagttgtccttctgctgtccgcaaagt
cccaacagtgtcccggaatgccctcaggacttctgcacgcctgaactccgcaagcttctg
tctccaatattcgatggaccggccaaatctccccctgcagcgagccccgctgaagagctg
cccatggagatggaaggagtggagaagttcttcgccctcaagcctgaggagagcctaacc
ccgaaaggacagtcagaggctgtggatgagcttgatttggacatgctagctccatatatc
tccatggacgatgacttccagttgaccttcctgccccagagtgaaataacaccacctttg
gaaatgctaaccagtaattctaggaaacggtgtttggaagatgatgatgatgatgacatt
cctgttttggctgctagatgggacaagaaacagatgagcggctccatagaggaccagctt
ctgctcagccacacattactggatggcttgtctgatggttctgatgaatttgaaccacca
cctcaaaagagaagtcagcttttaaccgacagggacccgttactgggcggagtgcaggca
ttgtgtgacacagcagctctcatgagggacactttcctgtctcgtccacctgacttacga
agacctgtcgcggaaacattgccatccctgacttga
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