KEGG   Danio rerio (zebrafish): 393397
Entry
393397            CDS       T01004                                 
Symbol
lsm14aa
Name
(RefSeq) LSM14A mRNA processing body assembly factor a
  KO
K18749  protein LSM14
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    393397 (lsm14aa)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     393397 (lsm14aa)
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 393397
NCBI-ProteinID: NP_956719
ZFIN: ZDB-GENE-040426-1567
Ensembl: ENSDARG00000006600
UniProt: Q6P111
Structure
LinkDB
Position
25:35889131..35909635
AA seq 443 aa
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIAPRDE
TFEYIIFRGSDIKDLTVCEPPKPTCSLPQDPAIVQSSLGSSTAPPSSFQSGNSYGLFNRP
PVAPYTQFNPSPLVSPQFGTVGVGSALGLFGSETGSAISSAFISDNLCGFIAEGSTSPAL
DSLRKSPPVESAVPSAPVVSSTLAAPGLGRKSPVSTRVASTNTQKHVDLTEQTRAGGPPA
ARRGRAGAHRGRGRFPVRREGPMKFEKDFDFESANAQFNKEEIDKEFQSKLKLKDEKPEK
ALNGEDKADSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDTRKAAERSGGSFF
PRQHRQTWAEERRMNAETFGLPLRRGRGGYRGRGGMGFRGGRGRGAGRGSFGPHPGFRGG
YRGSQGGREFADFEYRKENKIAV
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagcggtggcacgccgtatatcggcagtaaaatcagcctgatcagtaaagcggagatc
cgttatgaaggcattttgtacaccatcgacactgaaaactccaccgtcgcgctcgctaaa
gtgcgttcctttggcactgaggaccgtcccaccgaccggcccatcgcacctcgagatgag
acctttgagtatattatattcagaggaagtgacatcaaggacttgactgtctgtgaacca
ccaaaaccgacatgctctctgcctcaggacccggccattgttcagtcctctttgggatct
tccactgctcctccatcatccttccagtctggaaactcctacgggctgttcaaccgtccg
ccagtcgcaccatacacccagttcaacccttccccgctggtctcaccacagttcggcacc
gttggagtcggaagtgctttgggattgtttggtagtgaaactggcagtgccatttcctct
gctttcatcagtgacaatctgtgtgggttcatagcagaagggagcaccagtccggctctc
gactctctcaggaaaagcccaccagtggagtctgccgtcccatcagcccctgtggtctcc
tccacccttgctgcgccaggattgggccgcaagagtcctgtttccactcgcgtggcctcc
accaacacacagaaacatgtggatctgacggagcaaaccagagctggtggtcctcctgct
gctcggcgtggccgcgctggagctcaccgcggtcggggtcggttccccgtacgcagagaa
ggacccatgaagtttgagaaggactttgactttgagagcgccaatgctcagttcaacaaa
gaagagatcgacaaagagttccagagcaaactcaagctgaaagatgagaagccggagaaa
gctttgaatggagaggataaggcagattctggcgtcgacactcagaacagtgaaggaaac
gctgacgaggaggatcctctcgggccaaactgctactatgataaaaccaaatcattcttt
gacaacatctcctgtgatgataccaggaaggcagccgagaggtccggagggtcgtttttc
ccccgacagcacaggcagacctgggcggaggagcggcggatgaatgcggagacgtttggg
ctgccgttacggcggggccgcggagggtacaggggccgtggaggcatgggattcagaggg
ggccggggccgcggagctggacggggctcgtttgggccgcaccctggcttcagaggcgga
tacagaggaagtcaaggaggaagagaatttgctgactttgagtacaggaaggaaaacaaa
attgccgtgtag

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