Danio rerio (zebrafish): 393476
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Entry
393476 CDS
T01004
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
393476 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
393476 (prpf31)
Spliceosome [BR:
dre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
393476 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Glyco_hydro_59_C
Motif
Other DBs
NCBI-GeneID:
393476
NCBI-ProteinID:
XP_073780821
ZFIN:
ZDB-GENE-040426-1561
Ensembl:
ENSDARG00000095904
LinkDB
All DBs
Position
16:35275261..35284516
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AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGEEDGLYPGGEEGESDGEPGERQVDGGLEDIPEEMEVDYSSTESVT
SIAKLRHSKPFAEIMDKISHYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNELNI
IHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNETLQQILTNATIMVVSV
TASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAA
KIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQTLPPDLRR
KAARLVSAKCTLASRVDSFHESADGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDG
QRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQ
AQVNDSTKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAE
KKVAEANQKYFSNMAEFLKVKREKEDKV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagacgagctgcttgcggatttggaggaggcaggagaagaggacgggctg
tatcccggcggagaagagggagagagtgatggagagcccggagaaagacaagttgatgga
ggactggaggacatcccggaggagatggaggtggattacagcagcacggagagcgtcacg
tccatagctaaactacgacacagcaaaccgttcgctgaaatcatggataaaatcagtcac
tatgttggaaatcaacgcaagaattcagaagtgtctggaccggttgaagcagacccagag
tacaggctcattgttgccgccaacaatctgacggtggaaatagacaacgagcttaatatc
attcacaagtttgttcgtgacaagtactccaaaaggtttcctgagctggagtctctggtg
ccaaatgcactggactacatcagaactgttaaggagctgggcaacaatctggaaaagtgc
aaaaacaatgagacccttcagcagattctcaccaatgccaccattatggtggtcagcgtc
acagcctctaccacacaaggaacgatgcttggagatgatgagctccagcgattggaggag
gcctgtgacatggcccttgagctcaaccaatcaaaacacaggatctatgaatatgtggaa
tccagaatgtcattcattgctccgaatctttcaattattgtcggagcttcaactgctgcc
aagatcatgggtgttgccggtggtctgactaacctgtccaagatgcccgcatgtaatctg
atgttgctgggagcgcagaggagaacactgtctggattcagcagcacatctctgctgccc
cacacaggctacatctaccactgtgatgtagtgcagactctgcctccagatctaaggagg
aaagcagctcgtctggtttctgctaaatgcactctggcttctcgcgtggacagttttcat
gagagcgcagatggcaaggttggctatgatttgaaggaagagattgagaggaagtttgat
aaatggcaggagcctccaccagtcaagcaggtcaagcctcttccagctcctctggatgga
cagaggaagaagagaggaggaagaaggtatcgtaagatgaaagaaagactgggactgact
gagatcaggaaacacgccaacagaatgacttttgcagagattgaggacgatgcctatcag
gaggatctgggcttcagtctcggtcagctgggaaaatctggcagtggcagagtcagacaa
gctcaggtcaacgactccaccaaagccagaatatccaaatctttacagaggacactgcag
aagcagagcatgacgtacggaggcaagtctacagtgagagaccgatcgtctggaaccagc
tccagcgtggccttcactcctctacaggggctggagattgtgaacccacaggctgcagag
aagaaggtggctgaagccaatcagaaatatttctccaacatggctgagttcctcaaggtc
aagcgtgagaaggaggacaaggtgtga
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