Danio rerio (zebrafish): 393535
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Entry
393535 CDS
T01004
Symbol
chmp1a
Name
(RefSeq) charged multivesicular body protein 1a
KO
K12197
charged multivesicular body protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
dre04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
393535 (chmp1a)
09143 Cell growth and death
04217 Necroptosis
393535 (chmp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
393535 (chmp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
393535 (chmp1a)
Membrane trafficking [BR:
dre04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
393535 (chmp1a)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
393535 (chmp1a)
Exosomal proteins of other body fluids (saliva and urine)
393535 (chmp1a)
Exosomal proteins of colorectal cancer cells
393535 (chmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF6247
Ist1
DMSP_lyase
Motif
Other DBs
NCBI-GeneID:
393535
NCBI-ProteinID:
NP_956857
ZFIN:
ZDB-GENE-040426-1474
Ensembl:
ENSDARG00000102643
UniProt:
Q6PHF0
LinkDB
All DBs
Position
25:37435324..37442125
Genome browser
AA seq
198 aa
AA seq
DB search
MDDTLFQLKFTSKQLERLAKKAEKDSKSEQAKVKKALQQKNVECARVYAENAIRKKNEGL
NWLRMASRVDAVASKVQTALTMKGVAKNMTQVTKALDKALSSMDLQKVSAVMDKFETQVQ
NLDVHTSVMEDSMSSATTLSTPQQQVDDLILQIAEESGLEVEDQLSQLPAGASALGETSA
RAQEKEDQLSRRLAALRN
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacactgttccagctcaagttcacctcgaagcagctggagagactcgccaag
aaggccgagaaagactctaaatctgagcaggccaaagtcaagaaggctctgcagcagaag
aatgtggagtgtgcgcgtgtgtatgcagagaacgccatccgcaagaagaacgagggactg
aactggctgcggatggcgtctcgagtggacgcggtggcctctaaagtgcagacggcgctc
acgatgaagggcgtggccaagaacatgacgcaggtcaccaaagcgctggacaaggccctg
agctccatggacctgcagaaggtgtcggccgtcatggacaagttcgagacgcaggtgcag
aatctggacgtacacacctcggtgatggaggactcgatgagctccgccaccaccctcagc
acgccgcagcagcaggtggatgacctgatcctgcagatcgcggaggagagcggcctggag
gtggaggaccagctgagtcagctgccggccggagcctccgccctgggggagacatctgca
cgcgcacaggagaaggaggaccagctgagccgacggttggctgctttacgcaactga
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