Danio rerio (zebrafish): 393554
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Entry
393554 CDS
T01004
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
393554 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
393554 (trip13)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
393554 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_24
AAA_18
AAA_14
AAA_25
Viral_helicase1
TsaE
TIP49
AAA_7
NPHP3_N
NACHT
AAA_28
ATPase_2
RNA_helicase
AAA_33
KAP_NTPase
AAA_5
Cytidylate_kin
AAA_11
ATPase
AAA_30
SLFN-g3_helicase
RuvB_N
bpMoxR
AAA_17
DUF815
ABC_tran
AAA_19
Rad17
nSTAND1
Mg_chelatase
NB-ARC
IstB_IS21
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
393554
NCBI-ProteinID:
XP_005170182
ZFIN:
ZDB-GENE-040426-1488
Ensembl:
ENSDARG00000025043
UniProt:
Q6PH52
A0A8M2BHH9
LinkDB
All DBs
Position
16:57316850..57339777
Genome browser
AA seq
424 aa
AA seq
DB search
MDISDHHMTDVGIIRPDVHIEVHVKSQSTAKRSDVRTHVLSLLDRHSTVLRSFKWMDFDN
EFLTKNVESVTIADVTGPKLVDLKVHNLCIHIFTLNDDSPSTLNLEEEEELSAANLWLLP
AVEFHGVWESLIYEEGIKTQLLDYVSTTIFFSDKNVDSNLIAWNRVVLLHGPPGTGKTSL
CKGLAQKLSIRLSDRYAHSQFVEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKDALVF
VLIDEVESLTAARSAAQAGTEPSDAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKIDLA
FVDRADIKQYIGPPSAKAIFNIYLSSLEELMKRQIIYPRQQLVSLEELETMNFMESDVTR
LSLCLMNISQRSVGLSGRALRKIPFLAHALYGKTSTMTLKGFLTAMEHAVNKQRQEQASL
VNCV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacatctctgaccatcacatgactgatgttggcatcatccgtcctgatgtgcacata
gaggttcatgtcaaatctcagagcacagcgaagcgctctgacgtgaggacgcatgtgttg
tctctgctggatcgacacagcacagttttaaggtctttcaagtggatggattttgataat
gagtttcttaccaaaaatgtggagtcagtcactatagcagacgtaactggcccgaaactt
gtggatctgaaggttcacaacctctgcatccatattttcactctgaatgatgacagtccg
agcacgctcaatctggaggaggaggaggagctttctgctgccaatctttggctcctccca
gcagttgaatttcatggcgtttgggaaagcttgatttatgaggaaggcatcaaaacacaa
ctcttagattatgtttccacaacaattttcttctctgacaaaaatgtcgacagcaatttg
atcgcctggaatcgtgtcgtattacttcacgggccgcctggcacagggaagacatctctc
tgtaaaggacttgcccagaaactctccatcagactgtctgacaggtatgcacacagccag
tttgtggagatcaacagccacagtctcttctccaagtggttctcggagagtggaaaactg
gtgacgaagatgttccagaagattcaggagctcattgatgataaagatgccctggtgttc
gtcctaatagacgaggtggagagtctcacagcggcccgaagtgctgctcaggcaggaaca
gagccgtctgacgctattagggtggtcaattctgtcctgacccaactcgaccagatcaaa
cgccacccaaatgttgtcatcctcactacatccaacgtcacagaaaagattgatctggcg
tttgtggacagagctgacataaagcagtacatcggcccaccgagcgccaaagccatattc
aacatctatctgtccagtctggaggagctcatgaagcgtcagatcatctaccccagacag
cagctggtgagtttggaggaactggaaaccatgaacttcatggagagcgacgtgacccgc
ctgagcttatgtctgatgaacatctctcagaggagtgtgggactcagtggaagagccttg
aggaaaatcccattcctggctcatgcgctgtatggaaagacctctacaatgacgctgaag
ggttttctgacagcgatggagcacgctgtgaacaaacagaggcaggagcaggcgagtttg
gtcaactgtgtctga
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