Danio rerio (zebrafish): 393562
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Entry
393562 CDS
T01004
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
393562 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
393562 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
393562 (vps28)
Membrane trafficking [BR:
dre04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
393562 (vps28)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
393562 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
393562 (vps28)
Exosomal proteins of colorectal cancer cells
393562 (vps28)
Exosomal proteins of bladder cancer cells
393562 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
ADSL_C
Motif
Other DBs
NCBI-GeneID:
393562
NCBI-ProteinID:
NP_956884
ZFIN:
ZDB-GENE-040426-1527
Ensembl:
ENSDARG00000103203
UniProt:
Q6PH25
LinkDB
All DBs
Position
19:46222430..46238624
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AA seq
223 aa
AA seq
DB search
MFHGIPASGVMGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatggaatacctgcatctggagtgatgggaggagctcctgccaacaagccagaa
ctgtatgaggaagtgaagttgtacaaaaatgccagagaaagggaaaagtatgacaacatg
gcagagctgtttgctgttgtcaaaacactccaggccctggaaaaggcctacattaaagac
tgcgtgactccaaatgagtacacaggagcatgctccagattgcttgtccagtataaggct
gctttcaaacaagtccaggggtcagatgtgggctccatcgacgacttttgtcgaaaatac
aggctggactgtccgctggccatggagcgaatcaaagaggaccgaccgatcaccattaag
gatgacaagggcaacctgaatcgctgcattgcagacatcgtttcactttttatcacagta
atggacaaacttcgacttgaaattcgtgccatggatgagatccagcctgacctgagagag
ctgatggagaccatgaacaggatgagcaacatgcctccagattcagaggccaaagacaaa
gtcagcctctggttgaccacactgagcagcatgtctgcgtctgatgagctggacgactct
caggttcgccagatgctcttcgatctggagtctgcatacaacgccttcaatcgtttccta
cactcctcctaa
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