Danio rerio (zebrafish): 393565
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Entry
393565 CDS
T01004
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
393565 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
393565 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
393565 (srsf1b)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
SR proteins
393565 (srsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
TP2
Motif
Other DBs
NCBI-GeneID:
393565
NCBI-ProteinID:
NP_956887
ZFIN:
ZDB-GENE-040426-1467
Ensembl:
ENSDARG00000017843
UniProt:
Q6NYA0
LinkDB
All DBs
Position
21:complement(42846047..42854853)
Genome browser
AA seq
245 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGVGAPRGRYGPPSRRSEY
RVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFR
SHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSR
SRSRT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtgtaattcgagggcctgcagggaacaacgattgtcggatttacgtgggt
aatttaccccctgatatccgcaccaaagacgtcgaggatgtgttttataagtacggggcc
attcgggacatcgaccttaaaaacagaagaggaggtccgccgtttgctttcgtggagttc
gaggacccgagagatgcagaggatgctgtatatggacgtgatggctatgactatgacggc
tatcgtcttcgagtggagttcccaaggagtggcaggggaggtggaagaggtggaggtgga
ggtggtggagttggagctcccagaggcagatacggacctccatccaggcgttcggagtac
agggtcatagtgtcaggacttcctcctagtggcagctggcaggaccttaaggatcacatg
cgtgaagcaggtgatgtatgttatgctgacgttttccgagatggcaccggcgttgtggag
tttgtgcgcaaagaagacatgacctacgccgttcgaaagctggataacactaagttccgg
tcacacgagggggagactgcgtacattcgtgtaaaggtggatggcccgcgcagccccagt
tacgggcgctcgcgctctcgcagccggagcaggagccgtagccgaagcaacagccggagc
cgcagctactctccacgccgcagcagaggatctccacgatactcgccccgccacagccgt
tcccgctcccgcacctaa
DBGET
integrated database retrieval system
