Danio rerio (zebrafish): 393587
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Entry
393587 CDS
T01004
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1 precursor
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
393587 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
dre04990
]
393587 (lrfn1)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
SALM family
393587 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
dre04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
393587 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
fn3
Ig_2
ig
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
393587
NCBI-ProteinID:
NP_956909
ZFIN:
ZDB-GENE-040426-1227
UniProt:
Q6PGX3
LinkDB
All DBs
Position
15:45994123..46139017
Genome browser
AA seq
742 aa
AA seq
DB search
MERLVFCVLVFGALAKAQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVELRLTD
NFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSNQLK
GLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLD
HNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQHAQVLSEPKTSSSSRLTVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHQVTKPYV
MEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVHVHMIPLPLLVNNTGHMREADPGLSDISTSSRSSSNDSKTHSKRVLVE
NLTAHSAVIHWPSERHIPGIRMYQIQYNSTVDDTLVYRMIPSASKTFRINDLAAGREYEL
CVLAVYDDGITSLTATRVVGCVHFHTLPETNQCRFVPSQFLGGTMIIIIGGIIVASVLVF
IIILMIRYKAYSGGGGDTAKAKAGGDVSVHVHSQTNGSRSAATKQSEEPPESPAGKHCKA
LVLLKMMEDPQEELKVELPALCSAKPPSSRRASLAGPPSDDTQTDSSLTGSTMSLCLIGS
VPNEGPRKGPLANMSLLPSELARTRHRFSFDGDYALFQSHSYPRRARTRRHKSSSQINTD
TSPPCSRRVTFSSTEWMLESTV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctggtgttttgtgtgctggtgtttggtgcgctggcgaaggctcagctctgt
ccaggccgctgcatctgtcagaccatctcccccacactcaccctcctgtgcgccaaaacc
ggtctgctgttcgtgccgcccaccgtcgaccgcaaaaccgtggagctgcggctcacagac
aacttcatcacggccgtgcgcaggaaagactttctgaacatgaccagtttagtgcatctg
acgctctccagaaacaccatcagccagatcgcgccgcacgctttcatgggcctcaaatcc
ctgcgcgctttgcacatggacgggaaccgcctcagcgtcatcaacagcaaccaactcaaa
ggcctgatgaacctcagacacctgattttaggaaacaaccagatccaccacattgaagag
tcctcctttgacgagttcgtcgccaccatcgaggatctggatttatcctacaacaacctg
cggactttaccatgggaagccatcgctcgaatgactaacataaacacgctgaccttggac
cacaacctgatcgaccacatcggtgtgggcacgttcacgctgctcaccaaactagtgcgt
ctggacatgacctccaacaggctgcagactctccctccggacacgcttttccagcacgcg
caggttctgtccgagcccaagacttccagctcgtccaggctgacggtcagcttcggggga
aaccctctgcactgtaactgcgagctgctatggctgagacggctgacccgagaggatgat
ctggagacttgtgcttctcctgaacacctgatggacaaatacttctggtccattcaggag
gaggagttcatctgtgagccgccgctcatcaccaaacaccaggtcaccaagccgtatgtg
atggagggtcagggcgtgactctgaagtgtaaagccatgggtgaccctgatcccgcaatc
cactggcgcttcccggacggcaaactggtgcacaacaactcccgcaccattttatacgac
aacggcacgctggacatcctgatcaccacactgaaggacagcggtgcctttaactgcgtg
gcgtctaatgctgcgggcatcgccaccgctgccgtacatgtacacatgatcccgctaccc
ctgctggtcaacaacacaggccacatgcgggaggctgacccaggactctccgacatcagc
acctcctccaggtccagcagcaacgacagcaaaacacacagcaagagggtcctggtggag
aatctgaccgctcactccgccgtcatacactggccctcagagagacacattcctggcatc
cgcatgtaccagatccagtacaacagcactgttgatgatacactcgtctacaggatgatt
ccgtcagccagtaagacgttcaggatcaacgatctggctgcgggccgcgagtacgagctg
tgcgtgttagcggtgtatgacgacggcatcacgtcgctgacggcgacgcgcgtggtgggc
tgcgttcacttccacactctgccggagactaaccagtgccgcttcgtgcccagccagttt
ctgggaggaaccatgatcatcatcatcggcggcatcatcgtggcctccgtgctggtcttc
atcatcatccttatgatccgctataaagcctacagcggcggtggaggagacacagctaaa
gctaaagctggaggagacgtcagtgttcatgtgcactcgcagaccaacggcagcagatcc
gcagccaccaaacagagcgaagagccgcccgagtcgcccgccgggaaacactgcaaggcc
ctggtgctcctcaaaatgatggaggatccgcaggaggagctgaaggtggagctgccggct
ctgtgctccgctaaacctccgtcctccaggagagccagtctggccggacctccatccgac
gacacgcagacggacagcagcttgaccggctccaccatgtccctgtgtctgatcggctcc
gtcccgaacgagggccctcggaagggtccgctggccaacatgtcacttctgcccagtgag
ctggcgcggactcggcaccgcttctcctttgacggagactatgctttattccagagccac
agttacccacggcgggctcgaacccgcagacacaagtccagctcccagatcaacacggac
acatcgccgccctgcagccgcagagtgaccttcagcagcaccgagtggatgctggagagc
acagtgtga
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integrated database retrieval system
