Danio rerio (zebrafish): 393650
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Entry
393650 CDS
T01004
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform 2
KO
K09447
interferon regulatory factor 7
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04620
Toll-like receptor signaling pathway
dre04621
NOD-like receptor signaling pathway
dre04622
RIG-I-like receptor signaling pathway
dre04623
Cytosolic DNA-sensing pathway
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
393650 (irf7)
04621 NOD-like receptor signaling pathway
393650 (irf7)
04622 RIG-I-like receptor signaling pathway
393650 (irf7)
04623 Cytosolic DNA-sensing pathway
393650 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
393650 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
393650 (irf7)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
393650 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
393650
NCBI-ProteinID:
NP_001300708
ZFIN:
ZDB-GENE-040426-1518
Ensembl:
ENSDARG00000045661
UniProt:
H0WFC4
LinkDB
All DBs
Position
25:complement(25546789..25550944)
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AA seq
377 aa
AA seq
DB search
MQSTNAKPQFGPWLIEQVESGQYEGLSMIGHDIFRIPWKHNARRDLGDADVKIFKEWAIV
SGKINEYPNDKAKWKTNFRCALHSLKSFEMLEDHSKDPDDQHKIYRIIRPQNHQEIKSAI
QSAEAVQRQLPFIAEVYNASNHMSQDMELELLNLVETMDLNLHAVDQWNLDLEISISYRR
TEVLKTRLCSSLIHFFYQCDPSELRGEQIRFPTTDCLIDVKQIQYTKRILDSIQRGLQLE
VNQYGIYGFRQDKCKVFVSTSDPCEIQKPEPRKLQQNSKEQLLSFDKYIRDLLDFKENRG
GSPDYTIYLCFGEKLHDGKPLEKKLITVKVVPLICRELHERAQMEGASSLRNDNVSLQIS
HNSLYDLINSLGLPSVE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcacaaatgccaaacctcagtttggaccgtggctcatagagcaggtggaaagt
gggcagtacgagggtttgagcatgataggccatgacatatttcggatcccttggaaacac
aatgctcgaagagaccttggtgacgcggatgttaaaatattcaaggaatgggctatagtc
agcggcaagatcaacgagtatcctaacgacaaagcaaaatggaagacaaacttccgatgt
gcacttcacagtctcaaaagctttgagatgttagaggatcactccaaagatccagatgac
caacacaaaatatatcgcatcattcgtcctcaaaatcatcaagagatcaagagtgcgatc
cagagtgcagaggcagttcaacgtcagctaccattcattgctgaggtctacaatgcatca
aatcacatgtctcaagacatggagctggaattgctcaacttggtggaaacaatggatctt
aatctgcatgcagtggaccagtggaacctcgacctagagatctcaatcagttacagaaga
acagaagttttgaaaacacgtctgtgctcatcattaattcactttttctatcaatgtgat
ccatctgagctgagaggggagcaaatacgcttcccgaccacagactgtctgattgatgtc
aaacagatacagtacactaaacgcattttagacagtattcagagaggtctccagttggaa
gtaaaccagtacggcatctatggctttcgtcaggacaagtgtaaagtctttgtcagcacc
agtgacccatgtgagatccagaaaccagagcctaggaaactgcaacagaactccaaggaa
caactgcttagttttgacaagtacataagagatctactggattttaaagaaaacagagga
gggtctccagattacaccatctacctgtgctttggggagaagcttcatgatggaaaacca
ctggagaaaaaacttattactgtcaaagttgtccctctgatttgccgtgaacttcatgaa
agagctcaaatggagggagcatcatctcttcggaatgataacgttagcttgcaaatctcc
cacaatagcttgtatgacctcatcaattctctgggtctgccttcagtggaataa
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integrated database retrieval system
