Danio rerio (zebrafish): 393669
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Entry
393669 CDS
T01004
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
393669 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
393669 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
393669 (lsm4)
03041 Spliceosome [BR:
dre03041
]
393669 (lsm4)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
393669 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
393669 (lsm4)
Spliceosome [BR:
dre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
393669 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
393669
NCBI-ProteinID:
NP_956990
ZFIN:
ZDB-GENE-040426-1652
Ensembl:
ENSDARG00000023852
UniProt:
Q6P6E4
LinkDB
All DBs
Position
11:complement(6960344..6968724)
Genome browser
AA seq
143 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQNKPQGKGRGGGPGRGGGPGRGVFGG
RGRGMQGSGRGQQQDKKPGKQQV
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgttatctttactgaagacggcacagaaccacccgatgctggttgagttaaag
aatggcgagacatacaacggccatctggtcagctgcgacaactggatgaatataaacttg
agagaagttatttgcacttcacgggatggagataagttttggaggatgccagaatgctac
ataagaggaagcaccattaaatacttgcgaatccctgatgaaattatagatatggtgaaa
gaggaagtggtgtcaaagggccgtggccggggtggcatgcagcagaataagccacaagga
aagggcagaggaggtggacctggaagaggtggcggacctggcagaggtgtttttggtggc
cgtggcagaggcatgcagggatctggccgtggacagcaacaagacaaaaagcctggaaaa
caacaagtttga
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integrated database retrieval system
