KEGG   Danio rerio (zebrafish): 393759
Entry
393759            CDS       T01004                                 
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
  KO
K10886  DNA-repair protein XRCC4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    393759 (xrcc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    393759 (xrcc4)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     393759 (xrcc4)
SSDB
Motif
Pfam: XRCC4_CC XRCC4_C XRCC4 XLF DUF3138
Other DBs
NCBI-GeneID: 393759
NCBI-ProteinID: NP_957080
ZFIN: ZDB-GENE-040426-1755
Ensembl: ENSDARG00000010732
UniProt: Q6PBP2
LinkDB
Position
10:43117661..43183980
AA seq 357 aa
MRCRSSSVRQISISSEPQRCFFLKLEWAEDLGSGFVIFLCDGESAWSGEVSEEDVSREAR
EMEMERDRYVCDLQLALTGAPSGSGASDEGEFTFQLTPERPGRPQLQLSYEKVQKDISFR
LGVVDLQPVPEPTEVIRELITHGLEQSSRLQASNQHLLEENQKLRREQQHITEEMERYVK
GKEALERDLYSRFVLVLNEKKAKLRALQQRVRELEEAEEERSPRKKKADSEDHEAVEAAA
DKSPDEESDYGGSTEDEQEAEPKRLDPKPPTEEMPECSPMDDSLNDITDVAPCRKRRHRH
LQQLEAQAKRKTLEQQHRSREKPVEETKAATSRTSSVPVKPANTAANLDPDELFDDI
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgaggtgtcgcagcagtagtgtgcgtcagatctccatctcctctgagcctcagcgctgt
ttcttcctcaagttggaatgggctgaagatctcggctccggcttcgtcatctttctgtgt
gatggggaatctgcctggagcggtgaagtttccgaggaggacgtgtcgcgggaggctcgt
gagatggagatggagcgtgatcggtatgtctgtgacctgcagctggccctgaccggagca
ccatcaggatctggagcttcagatgagggtgaatttaccttccagctgacacctgagcgg
cccggacgaccccaactgcagctgtcttatgagaaggtgcagaaggacatctcgttcagg
ctgggcgtggtggatctgcagccggtgccggagcccactgaagtcatccgggagctcatt
actcacggcctggagcaaagctcacgtcttcaggcctcaaaccagcacctgttggaggag
aaccagaagctgaggagagaacagcagcacatcactgaagagatggaacgatacgtgaag
ggaaaggaggcgttagagagagacctgtacagccgctttgtgctggtcctcaatgagaag
aaagccaaactccgagccctgcagcagagggtccgagagctggaggaggctgaggaggag
agatcaccgagaaagaaaaaggcagatagtgaagatcatgaagcggtggaggcggcagca
gataagagtcctgatgaagagagtgattatggaggaagtacggaagatgaacaggaagca
gaacccaaacgcctcgacccaaaacctcctacagaagagatgccagaatgcagcccgatg
gatgacagtctgaatgacatcacagacgtggctccgtgccgtaaacgccgccatcggcac
ctgcagcaactcgaggctcaagccaaacgcaaaacgctggagcagcagcacagatccaga
gagaagccggtggaagaaaccaaagctgcgaccagcagaacgtcaagtgtcccggtgaag
cctgcaaacactgctgcaaaccttgatccagatgagctgtttgatgatatatga

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