Danio rerio (zebrafish): 393759
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Entry
393759 CDS
T01004
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
393759 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
393759 (xrcc4)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
393759 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
DUF3138
Motif
Other DBs
NCBI-GeneID:
393759
NCBI-ProteinID:
NP_957080
ZFIN:
ZDB-GENE-040426-1755
Ensembl:
ENSDARG00000010732
UniProt:
Q6PBP2
LinkDB
All DBs
Position
10:43117661..43183980
Genome browser
AA seq
357 aa
AA seq
DB search
MRCRSSSVRQISISSEPQRCFFLKLEWAEDLGSGFVIFLCDGESAWSGEVSEEDVSREAR
EMEMERDRYVCDLQLALTGAPSGSGASDEGEFTFQLTPERPGRPQLQLSYEKVQKDISFR
LGVVDLQPVPEPTEVIRELITHGLEQSSRLQASNQHLLEENQKLRREQQHITEEMERYVK
GKEALERDLYSRFVLVLNEKKAKLRALQQRVRELEEAEEERSPRKKKADSEDHEAVEAAA
DKSPDEESDYGGSTEDEQEAEPKRLDPKPPTEEMPECSPMDDSLNDITDVAPCRKRRHRH
LQQLEAQAKRKTLEQQHRSREKPVEETKAATSRTSSVPVKPANTAANLDPDELFDDI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtcgcagcagtagtgtgcgtcagatctccatctcctctgagcctcagcgctgt
ttcttcctcaagttggaatgggctgaagatctcggctccggcttcgtcatctttctgtgt
gatggggaatctgcctggagcggtgaagtttccgaggaggacgtgtcgcgggaggctcgt
gagatggagatggagcgtgatcggtatgtctgtgacctgcagctggccctgaccggagca
ccatcaggatctggagcttcagatgagggtgaatttaccttccagctgacacctgagcgg
cccggacgaccccaactgcagctgtcttatgagaaggtgcagaaggacatctcgttcagg
ctgggcgtggtggatctgcagccggtgccggagcccactgaagtcatccgggagctcatt
actcacggcctggagcaaagctcacgtcttcaggcctcaaaccagcacctgttggaggag
aaccagaagctgaggagagaacagcagcacatcactgaagagatggaacgatacgtgaag
ggaaaggaggcgttagagagagacctgtacagccgctttgtgctggtcctcaatgagaag
aaagccaaactccgagccctgcagcagagggtccgagagctggaggaggctgaggaggag
agatcaccgagaaagaaaaaggcagatagtgaagatcatgaagcggtggaggcggcagca
gataagagtcctgatgaagagagtgattatggaggaagtacggaagatgaacaggaagca
gaacccaaacgcctcgacccaaaacctcctacagaagagatgccagaatgcagcccgatg
gatgacagtctgaatgacatcacagacgtggctccgtgccgtaaacgccgccatcggcac
ctgcagcaactcgaggctcaagccaaacgcaaaacgctggagcagcagcacagatccaga
gagaagccggtggaagaaaccaaagctgcgaccagcagaacgtcaagtgtcccggtgaag
cctgcaaacactgctgcaaaccttgatccagatgagctgtttgatgatatatga
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integrated database retrieval system