Danio rerio (zebrafish): 393963
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Entry
393963 CDS
T01004
Symbol
srp54
Name
(RefSeq) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03060
Protein export
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
393963 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dre02044
]
393963 (srp54)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
393963 (srp54)
Secretion system [BR:
dre02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
393963 (srp54)
Eukaryotic Sec-SRP protein
393963 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
NPHP3_N
AAA_33
DUF2209
ResIII
MeaB
AAA_17
SRPRB
AAA_22
AAA
MobB
APS_kinase
AAA_19
Zeta_toxin
AAA_30
AAA_31
PduV-EutP
6PF2K
MMR_HSR1
nSTAND_NTPase7
AAA_16
ATP_bind_1
AAA_18
Thymidylate_kin
Torsin
KTI12
Motif
Other DBs
NCBI-GeneID:
393963
NCBI-ProteinID:
NP_957282
ZFIN:
ZDB-GENE-040426-818
Ensembl:
ENSDARG00000098367
UniProt:
Q7ZVN5
LinkDB
All DBs
Position
17:11265294..11281059
Genome browser
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK
SENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttttagctgatctggggaggaaaataacctcagctttgaggtctctcagcaatgcc
accatcatcaatgaggaggtattaaatgctatgctcaaagaagtctgtgctgccctgctg
gaggctgatgtgaatatcaagttggtaaagcagcttagggaaaatgtcaaggcagccatt
gatttggaggagatggcctccggtctgaacaagagacgaatgatccaacatgccgttttc
aaggaacttgtcaagctagtggatcctggagtgaaagcttggactccgacaaaaggaaag
aacaacgtcatcatgtttgtgggtctgcagggcagtgggaaaaccacaacatgttctaag
ttggcatactacttccaaagaaaaggatggaaaacgtgtttgatttgtgctgacacattc
agagcaggtgcctttgaccaactcaagcaaaatgcaacaaaagccagaatacccttttac
ggcagttacacagaaatggacccggtgatcatagctgcagaaggtgtagaaaaattcaag
tcggaaaactttgaaataatcatcgtggacacaagtggtagacataaacaggaagactcg
ctttttgaagaaatgcttcaggtgtcaaatgctgtgcaacctgacaatatagtgtacgtg
atggacgcctccattggtcaggcttgcgaggctcaagctaaggcctttaaagacaaggta
gatgtggcttctgttattgtcaccaaactggacggccatgccaagggtggtggtgcgctc
agtgctgtggctgccacaaagagtcccatcatttttatcggcacaggcgagcacattgat
gactttgagcctttcaaaactcagcccttcataagcaaactacttggtatgggagacatt
gagggactgattgacaaagtgaatgaactaaagcttgatgacaacgaggagctaattgac
aagcttaaacacggtcagtttacactcagggacatgtatgagcagtttcagaacatcatg
aagatgggacccttcggtcagatcatgggcatgatcccaggtttcggaaccgatttcatg
agcaaaggaaacgagcaggagtctatggccaggctaaagaaactcatgacaataatggat
agtatgaatgaccaggaactggacaacaaagatggcgccaagctcttcagcaaacagccg
aaccgcatccagcgagtggcccgggggtctggagtggccaccagggatgtacaagagttg
ctcacccagtacacaaagtttgcccagatggtcaagaagatgggaggcattaaaggcttg
tttaaaggaggagacatgtccaagaacgtcaacccatcacagatggcgaaactgaaccag
cagatggctaaaatgatggatccaagagtgcttcatcacatgggtggcatggccggactg
cagtctatgatgaggcagtttcaacagggagctgctggcaacatgaaaggcatgatggga
tttaacaacatgtga
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