Danio rerio (zebrafish): 393966
Help
Entry
393966 CDS
T01004
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
393966 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
393966 (ppil2)
03110 Chaperones and folding catalysts [BR:
dre03110
]
393966 (ppil2)
04121 Ubiquitin system [BR:
dre04121
]
393966 (ppil2)
Enzymes [BR:
dre01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
393966 (ppil2)
Spliceosome [BR:
dre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
393966 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
393966 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
393966 (ppil2)
Chaperones and folding catalysts [BR:
dre03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
393966 (ppil2)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
U-box type E3
393966 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
Motif
Other DBs
NCBI-GeneID:
393966
NCBI-ProteinID:
NP_957285
ZFIN:
ZDB-GENE-040426-1096
Ensembl:
ENSDARG00000002016
UniProt:
Q6IQJ6
LinkDB
All DBs
Position
5:12908781..12979975
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITSTEYTQFYGGKKAEIPQANFRRLPFDHCSLSLQPFEYPMCTVDGVV
FDLMSIVPWIKRFGTNPITGEKLEAKSLIKLNFSKNNEGKYHCPVLYTVFTNNSHIVANK
VTGNVFSNEAVEQLNIKTKSYKDLLTDEPFTRQDLITLQDPTNLDKFNVSNFFHVKNNMK
VLDPDEEKAKQDPSYHLKSTNLETRETLAELYRDYKGDELLASTMKEPEAKKTDKFNAAH
YSTGRVSASFTSTAMAPATNHEADAIADDAVRYQYVKKKGYVRLHTNKGDLNVELHCDKV
PKAGENFIKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDRKHSVFGRVVGGLETLSAMENVESDPKTD
KPKSEIKILSTSVFVDPYEEADAQIAAEREKEAQKVEEERAQTSALVNKAKTEEKPKAFR
PGVGKYINMSATKHSHPDAEKPSTSEAPAKKPKGRTGFGDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagacagcatcaaaaagacaagatgtacattacatctacagaatacacccag
ttttatggagggaagaaagcagaaatcccacaagccaatttcagacgcttgccctttgat
cattgcagtttgtctcttcagccctttgagtatcccatgtgcacagtggatggggtggtt
tttgacctaatgagcatagtgccttggattaagagatttggcaccaaccccataactgga
gagaagctggaggctaaatcccttatcaagcttaacttcagcaaaaacaatgaaggaaag
taccactgtcctgtgctctacaccgtcttcacaaacaactcccacatcgttgctaacaaa
gtcacagggaatgttttctctaatgaggcagtagagcagctcaacattaagaccaagagt
tataaagacctgttgacggatgaaccattcacacgccaggatctcatcactctacaggat
cctacaaatttggataaattcaatgtctccaacttctttcatgtgaaaaacaatatgaaa
gtcctcgaccccgatgaggagaaagcaaaacaggacccatcataccatctgaaaagcaca
aatctggagacgcgagagacacttgcggagctctatagggactataaaggagatgagctg
ttggcctcgactatgaaagagccagaagccaaaaaaacagacaagttcaatgctgctcac
tattccactggaagagtgtctgcctccttcacatctacagctatggctccagccaccaac
catgaagcagatgctattgctgacgatgctgttcgctaccagtatgttaagaagaaaggc
tacgtgcgcttgcacacaaacaaaggagacctgaatgtggagttacattgtgataaggtc
cccaaggctggagaaaactttattaaactctgtaagaaaggatattacgatggcacagta
tttcaccgctctattcgaaatttcatgattcaaggaggagaccctacagggactggtaca
ggcggtgagtctttctgggggaagccattcaaagatgagttcagacccaatctgtctcac
actggccgtgggattctgagcatggccaactcgggaccaaacacaaataaatcacagttc
tttataacatttcgctcctgcgcatacctggaccggaagcacagtgtttttggaagagtg
gttggtggtttagagactctctcagcgatggagaatgttgaaagtgatccgaagacagac
aaacccaagtctgagattaagatactgagcacttcagtttttgtggacccatatgaagaa
gcagatgcccagattgcagcggagcgagagaaggaagctcagaaagtggaggaagagaga
gcacaaacttctgctctagtcaacaaggcaaaaactgaggaaaagcctaaagccttcaga
ccaggagtgggaaaatacatcaacatgtctgctacgaaacattcccatcctgatgcagag
aaaccctccactagtgaagctccggccaaaaaacctaaaggcagaactggttttggagac
ttcagctcctggtag
DBGET
integrated database retrieval system
