Danio rerio (zebrafish): 393968
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Entry
393968 CDS
T01004
Symbol
zgc:55733
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
KO
K12884
heterogeneous nuclear ribonucleoprotein C1/C2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
393968 (zgc:55733)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
393968 (zgc:55733)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
hnRNP proteins
393968 (zgc:55733)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
393968
NCBI-ProteinID:
XP_021333117
ZFIN:
ZDB-GENE-040426-791
Ensembl:
ENSDARG00000103845
UniProt:
A0A8M9PNP7
LinkDB
All DBs
Position
7:complement(3810043..3848274)
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AA seq
315 aa
AA seq
DB search
MDHSPTTSSLMASNVTNKTDPRSLNSRVFIGNLNTMLVTKADVEAIFSKYGKIVGCSVHK
GFAFVQYANERNARAAVNGEDGRMIVGQVLDINLAGEPKPHRSKTIKRSAGDMYSSSFDL
DYDFQRDYYDRMYSYPSRVPPPPPPLSRAVIPSKRARVSVSGSRRTKSSFSSKSSQRTSR
TSETRTLISHCNKKSGCFDLKIYRHIQMRADDLQTIKKELTQIKHKVDYLLESLERMERD
HSKKSDVKSAKAEEVSPQHGKKDRENSEMNDYEDEGDLLEEEEIKSRGREDDEEEEDGEQ
EEGEDDGDSANGDHA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcccccactaccagcagcctgatggccagtaatgtcaccaacaagacggac
ccgcgttcgctcaactcccgcgtcttcatcgggaacctcaacaccatgctggtgaccaag
gccgatgtggaggccatctttagtaagtacgggaagatcgtgggctgctccgtgcacaaa
ggcttcgcgtttgtccagtacgccaacgagaggaacgccagagctgcggtcaacggtgaa
gacgggaggatgatcgtgggacaggtactcgatattaatctggctggcgagcccaaacct
caccggtcaaagaccatcaagcgctctgcaggagacatgtacagttcttcgtttgatctg
gactatgactttcagagggattactacgacaggatgtactcgtacccgtcacgtgttcct
cctcctccacctcctctgtctcgagctgtgatcccgtccaagcgtgcacgtgtgagtgtg
agcggcagcaggaggaccaagagcagcttcagctccaagagcagccagcgcacgtcccgc
accagtgagacacgcaccttaatctcacactgtaataaaaaatctgggtgttttgacctg
aaaatttacagacacattcaaatgagagctgacgatctccagaccattaagaaggaactg
actcagattaaacacaaagtggactacctgctggagagtctggagcgcatggagagagac
cacagcaagaaatcggatgtgaagagcgctaaagcagaagaggtgtcgccgcagcacggg
aagaaagatcgagaaaactctgaaatgaacgactatgaggatgaaggagatctgctggag
gaagaggagatcaagagtcgaggaagagaggatgatgaggaggaagaggacggcgagcag
gaggaaggagaggatgatggagacagtgccaacggagatcatgcttaa
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