KEGG   Danio rerio (zebrafish): 394014
Entry
394014            CDS       T01004                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    394014 (wdr1)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   394014 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_TEP1_C eIF2A Beta-prop_NUP159_NUP214 PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 RMC1_N DUF7165 Beta-prop_RIG_1st PROPPIN Beta-prop_ELP1_1st Beta-prop_SCAP WD40_like Beta-prop_ELP1_2nd Beta-prop_DCAF12 Beta-prop_WDR11_1st KNTC1_N WDR54 DUF5711 WD_LRWD1 HPS3_N WD40_RFWD3
Other DBs
NCBI-GeneID: 394014
NCBI-ProteinID: NP_957333
ZFIN: ZDB-GENE-040426-804
UniProt: Q7ZVQ3
LinkDB
Position
14:complement(186849..211913)
AA seq 606 aa
MSYELKRVFASLPHMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIENPAIADVYTEHPHQ
VIVAKYCPSGFYIASGDVSGKVRIWDTTQREHLLKYEYQPFGGKIKDIAWTEDSKRLAVV
GEGREKFGAVFLWDTGSSVGEIVGHSKIINSVDIKQTRPYRLVTGSDDNCTTFLEGPPFK
FKCTMTDHSRFVNCVRFSPDGSRYASAGADGQIFLYDGKTGEKLSSLGGEKAHDGGIYAV
SWSPDSTQLISASGDRTVKLWDVGSGTSVSTFSLGSDVLDQQLGCLWVNKHLLSVSLSGY
INYLDRNNPNRPLRTIKGHTKSIQCVTVHKADGRTSIYSGSHDGHINYWDAESGENEAFV
GKGHSNLVSRMMVDDAERLVTCSMDDTVRYTDLKKKEYSASDMVKMDVQPKCVSVGPGGL
AVTVCIGQLVLLKDKKKLFTLDSLDYEPEAVAVHPGGGTVAVGGADGKVHLYSVQGNTLK
DDGKALEVQGPVTDMSYSKDGAFLAVTDEKKVVTVFTVADAYKEKSEFYGHHAKVVCLSW
SPDNEHFATSGMDMMVYVWTASDTEKRIKLPDCHRLHHVSGLAWLNPNTLVTTSHDACIK
QWTLKI
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcctacgagctcaagcgagtgttcgccagcctgcctcatatggagaggggcgtggcc
aaagtcctgggcggagacccgaaaggaaacaacttcctgtacaccaacggcaagagtgtg
atcatcaggaacatcgagaaccctgcgatcgctgacgtctacaccgagcatccccatcag
gtcatcgtggccaaatactgtcccagtggcttctacatcgcatcgggcgacgtgtcaggg
aaggtgcgtatctgggacaccacacagaaggagcacctgctgaagtacgagtatcagccg
ttcggcgggaagatcaaagacatcgcctggactgaagacagcaagaggctggcggtggtg
ggggaggggcgagagaagtttggtgcagtgttcctctgggacaccggttcttcagtgggg
gagattgtgggtcacagtaagatcatcaacagtgtggacatcaagcagacgcgtccgtat
cggctggtgaccggcagcgacgacaactgcaccaccttcctggagggcccgccgttcaag
ttcaagtgcaccatgaccgatcacagccgcttcgtcaactgtgtgcgcttctctcctgat
ggaagtcgttacgcttctgccggggctgatggacagatcttcctgtatgatggtaagact
ggagagaagctgtcgtctctgggaggagagaaggctcatgatggagggatctacgctgtg
agctggagtcctgacagtacgcagctgatctccgcatcaggtgaccggacggtgaagctg
tgggacgtgggcagcgggacgagcgtctccaccttcagtctgggctcggatgttctggat
cagcagctgggctgtctgtgggtcaacaaacacctgctgagcgtctctctgtccggatac
atcaactacctggacagaaacaaccccaaccgcccgctgcgcaccatcaagggtcacact
aagtccatccagtgtgtgacggtccacaaggcggacggacggacgagcatctactccggc
agtcatgatggacacatcaattactgggatgcggagagcggggagaacgaggcgttcgtg
ggtaaaggacactccaatctggtgtccaggatgatggtggacgacgcagagcggctggtg
acctgcagtatggacgacaccgtgcgctacactgacctgaagaagaaggagtacagtgcg
tctgatatggtcaaaatggacgtgcagccgaagtgtgtgagtgtggggccaggaggactc
gccgtcactgtgtgtatcggacagctggttctgttgaaggacaagaagaagctcttcact
ctggactctctggactacgagcccgaagctgtggctgttcatcctggaggcgggactgtt
gctgtgggcggagctgacgggaaggtgcatctgtattctgttcagggaaacacactgaag
gatgatgggaaggcgctggaggtgcagggacccgtgacggacatgtcttactctaaagat
ggagcgtttctggcggtgacggatgagaagaaggtggtcacggtgttcaccgtcgccgat
gcgtacaaggagaagagtgagttctacgggcatcatgcgaaggtggtgtgtctgtcctgg
tctccagataatgagcacttcgccaccagcgggatggacatgatggtgtacgtgtggaca
gccagcgacactgagaagaggatcaagctgccggattgtcaccggctgcatcacgtcagc
ggtctggcctggctgaaccccaacacactcgtcaccacatctcacgacgcctgcattaaa
cagtggactctgaaaatctga

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