Danio rerio (zebrafish): 394038
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Entry
394038 CDS
T01004
Symbol
chad
Name
(RefSeq) chondroadherin precursor
KO
K06248
chondroadherin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
394038 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dre00535
]
394038 (chad)
Proteoglycans [BR:
dre00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
394038 (chad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_14
LRR_9
A-2_8-polyST
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
394038
NCBI-ProteinID:
NP_957357
ZFIN:
ZDB-GENE-040426-1130
Ensembl:
ENSDARG00000045071
UniProt:
Q7SYE5
LinkDB
All DBs
Position
12:26512569..26525699
Genome browser
AA seq
363 aa
AA seq
DB search
MYTFHVLLVLVCLQFCAHTAFAAPTQCPSQCHCHGDLQHVICDNVGLKKIPRISEATRLL
NLQRNNLGNLPTGGFSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKP
GAFEDLTELTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWL
YMSGNELSSIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIPD
HAFRSFGRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSLPNSLEFSTIQNIT
LFNNPWSCTCPLTNLRKWMDTTRNRPDAVCASPANQKGKQIRDSTAFTRCKGKTKRARKG
TRL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtacacttttcatgtcttactggtgctagtgtgtctacagttttgtgctcacactgct
tttgcagctccaactcagtgcccaagccagtgccactgccatggggacctgcagcatgtt
atttgtgacaatgttgggctaaagaagatccctcgcatatctgaagccacgcgtctcctc
aacctgcaacgcaacaacttggggaatctaccaactgggggcttcagtgagatgaaaggg
ctcatttctctgcacctgcagcattgccagatccgagagctctccggccaggctttcaaa
gggctcaacaagctcatctacctctacctgtctgataatgagatcagcaccattaaaccc
ggtgcttttgaggatctaacagaactcacctatctctacttggacggcaaccaaatcaca
agccttccgaagggcatcttttcccccatgattaacctgttcatcctgcagctcaacaac
aacaagcttcgagagctgcagcctggtactttcaaaggtgctaaggatctccgctggctt
tacatgagtggcaacgagctgagctccatacagcctggttctcttgatgaagtggagaac
ttggccattctaaccctggaccagaacaacctgtccacataccctctcctggctatgagc
aagctgcgtgttgtggaggaactcaacctctccaaaaaccctctcagcctcatccctgac
catgcattccgaagcttcggacgctacatggagaagctccatctaaatgacatgagcctg
gagaagttttccaatgctgcctttgagggagtgacggctctcaaatctctgcatctggag
aacaacaagctgaggtcactaccaaacagccttgagttcagcaccatccaaaacatcact
ctgtttaacaatccctggagctgcacctgcccattaacaaacctcagaaaatggatggac
actactcgtaatcgcccagatgcagtttgcgcttcacctgccaaccagaaaggaaagcaa
ataagagacagcactgctttcacccgctgcaagggaaaaacaaagagggccaggaagggg
acacgactttga
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integrated database retrieval system
