Danio rerio (zebrafish): 394053
Help
Entry
394053 CDS
T01004
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03013
Nucleocytoplasmic transport
dre03015
mRNA surveillance pathway
dre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
394053 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
394053 (eif4a3)
03015 mRNA surveillance pathway
394053 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
394053 (eif4a3)
03041 Spliceosome [BR:
dre03041
]
394053 (eif4a3)
03009 Ribosome biogenesis [BR:
dre03009
]
394053 (eif4a3)
03012 Translation factors [BR:
dre03012
]
394053 (eif4a3)
Enzymes [BR:
dre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
394053 (eif4a3)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
394053 (eif4a3)
mRNA cycle factors
Stress granule specific factors
394053 (eif4a3)
Spliceosome [BR:
dre03041
]
Complex C
Other components
EJC/TREX
394053 (eif4a3)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
90S particles
Helicases
394053 (eif4a3)
Translation factors [BR:
dre03012
]
Eukaryotic type
Initiation factors
eIF-4
394053 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
394053
NCBI-ProteinID:
NP_957372
ZFIN:
ZDB-GENE-040426-915
Ensembl:
ENSDARG00000102978
UniProt:
Q7ZVA6
B2GTC1
LinkDB
All DBs
Position
11:complement(47127438..47143981)
Genome browser
AA seq
406 aa
AA seq
DB search
MATAVVPVRKRILKEEDMTKIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgtcgttcccgtgaggaaaaggatcctgaaggaggaagacatgacgaag
attgagtttgagacgagtgaagaagtggacgtgacgccgacgtttgacacgatgggcctg
agggaggatttactgcgcgggatctacgcatacggttttgagaagccatcggccatccag
cagagagccatcaaacagatcatcaagggcagagacgtcatcgcacagtcacagtctgga
actggtaaaacggccaccttctgtgtctcagtgctgcagtgtctggatatacaggtacga
gagactcaagcgttgattttggctccaaccagagagttagcaggacagatccagaaggtt
ctactggctctgggcgactacatgaacgttcagtgtcacgcgtgtatcggcggcacaaat
gtcggtgaagacatccggaagctggattacggtcagcacgtggtggcaggaacgcctgga
cgagtgttcgacatgatccgcaggaggagtttaaggactcgcgccatcaagatgctggtg
ttggatgaagctgatgagatgctcaacaagggttttaaggaacagatttacgacgtgtac
cgatacctgccgccggccactcaggtgtgtctgatcagcgccacactgccacacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgcatcctggtcaaacgtgatgag
ttgactctggagggcattaagcagttcttcgtggccgtggagcgcgaggagtggaagttc
gacactctgtgtgatctgtacgacacgctgaccatcacacaggccgtcatcttctgcaac
accaaacgcaaggtggactggctgacagagaaaatgagggaggcaaatttcaccgtatcc
tcgatgcatggagacatgcctcagaaagagcgagagtccattatgaaggagttcagatct
ggagccagtcgagtgttgatctccacagacgtttgggccagaggtctggatgtgccgcag
gtttccctcatcattaactacgatcttcccaacaacagagagctgtacatccacaggatt
ggtcgatcgggtcgttacggcaggaagggtgtggccatcaactttgtgaagaatgacgac
atccgtatcctgcgtgatatcgagcagtactactccacacagatcgatgaaatgcccatg
aacgtggctgatctgatctga
DBGET
integrated database retrieval system
