KEGG   Danio rerio (zebrafish): 394059
Entry
394059            CDS       T01004                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    394059 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    394059 (cdc5l)
   03400 DNA repair and recombination proteins [BR:dre03400]
    394059 (cdc5l)
Spliceosome [BR:dre03041]
 Complex B
  Other components
   Prp19 complex
    394059 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    394059 (cdc5l)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    394059 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C DUF4072
Other DBs
NCBI-GeneID: 394059
NCBI-ProteinID: NP_957378
ZFIN: ZDB-GENE-040426-821
Ensembl: ENSDARG00000043797
UniProt: Q803E9 E9QIC1
LinkDB
Position
17:6188238..6641448
AA seq 800 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHMAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRENEDDVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMEQYDPLEPDFK
RLRQQHLDGELRSEKEDRDRKKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEIARQTAEESGITNSASSALLSEYNVTNNSMALRTPKTPAAQD
KILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSHTG
EGLTPHGGLTPKASVGVTPGRTPLRDKLNINTEEGGVDYTDPSFSKHMQRESREHLRLGL
MSLPVPKNDFEIVLPENAEKELEETEVDESFVEDAAEIELRKQAVRDAEREKELRQRHTS
VQRDLPRPSEVNETILRPHNVEPPLTDLQQAEELIKREMITMIHYDCLHHPFSDAKKTKG
VNSSSNNAEHISYLEKTPYEKVSEEELKKAGDLLLQEMEVVKHGMGHGDLSMEAYNQVWE
ECYSQVLYLPGQSRYTRANLASKKDRIDSLEKKLEMNRGHMTAEAKRAAKMEKKMKILLG
GYQSRAMGLLKQLSEVWDQLEQANLELHTFMELKKQEDLAIPRRQEALREDVQRQQEREK
ELQQRFADLMLDKQTLSSKI
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgccgcggattatgattaaaggaggcgtctggcgcaacaccgaggatgagattctcaaa
gcagctgttatgaaatatggcaaaaaccaatggtctcgaattgcgtccctgctgcaccgc
aaatcagccaaacagtgtaaagccagatggtacgagtggttggaccccagtattaagaag
acagaatggtcacgtgaggaagaggagaagctccttcacatggccaagctgatgcccact
cagtggagaactatcgcccccatcatcgggcgcacagccgctcagtgtctggagcattat
gaatatctgctagataaagcagctcagagagagaatgaagatgatgtgggagacgatcct
cgcaagctgaaaccaggagagatcgacccaaacccggagaccaaaccagctagacctgac
cctgtggacatggacgaagatgagctggagatgctgtctgaggccagagctcgactggca
aacacacaaggcaagaaagcaaagcggaaagccagagagaaacagctggaagaagcacgt
cgtctggccgcccttcagaagcgccgagaactgcgagccgctggtatcgacatccagaag
aagcgcaagaagaagagaggagtcgattataatgctgagatcccgtttgagaagaaaccc
gctcagggtttttatgatacgtccatggagcagtacgatcctctggagccagacttcaaa
cgcttgcggcagcagcatctggatggggaactgcggagtgaaaaggaggatcgtgaccga
aagaaggacaggcagaagatcaagaagaagaaggagtctgatctgccctcagctattctg
cagaccagtggagtgtcagagttcaccaagaagaggagcaaactagtgctgccggcacca
cagatatctgacgctgagctggaggaggtggtcaaactgggtcaggccagtgaaatagcc
cgtcagacggcagaggagtctggcatcactaactcggcctccagtgcgcttctgtctgaa
tataacgtcaccaataactccatggccctgcgcacacccaaaactccagccgcacaggac
aagatcctgcaggaggctcagaacctgatggctcttaccaatgtggacactcctctgaaa
ggaggactgaacactcctcttcatgagagtgatttctctggggtcacaccgcagagacag
gttgtccagacgcccaatactgtgctgtctacacccttcagaacccccagtcacacaggc
gagggtttgactcctcatggtggactgactcccaaagcctcagtgggtgtgactccaggc
cggacaccattgcgggacaaactcaacatcaacactgaagaggggggagtagactacaca
gacccgtccttctccaaacacatgcaaagagagtctcgtgagcatctacgactgggtctg
atgtctctgccggtgcccaaaaatgactttgagatcgttcttcctgaaaacgctgagaaa
gagctggaggagacggaggtggacgagagctttgtggaggacgcggctgagatcgaactg
cgtaaacaggctgtcagagatgctgagagggagaaagagctgcgccagagacacacatcg
gttcagagagatttaccaagaccttcagaagtgaacgagacgattctccgtcctcataac
gtggagcctcctctgaccgatttgcagcaggcagaagagctgatcaagcgagagatgatc
accatgatccactacgactgtctgcatcaccccttcagcgacgccaagaagactaaagga
gtgaactccagttccaacaacgccgagcacatctcctacctggagaaaacaccctacgag
aaggtctccgaggaggagctcaaaaaggctggagatctgctcctgcaggagatggaggtg
gtcaagcatgggatgggtcatggagatctgtccatggaggcgtataaccaggtgtgggag
gagtgttacagtcaggtgctgtacctgcccggtcagagccgctacaccagagctaacctg
gccagcaagaaggacaggatcgactctctggagaaaaagctggagatgaaccgtggccac
atgacggcggaggcgaagcgagcagcaaagatggagaagaagatgaagatcctgctgggt
ggatatcagtcgagggcgatgggcttgctgaagcagctcagtgaagtgtgggatcagctg
gagcaggccaacctggagctgcacaccttcatggagcttaagaagcaggaggatctggcc
atcccacgcagacaagaggctctgagagaagatgttcagcgtcagcaggagcgagagaaa
gagctgcagcagagatttgctgacctgatgctggacaaacagaccctcagcagcaagatc
tga

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