KEGG   Danio rerio (zebrafish): 394064
Entry
394064            CDS       T01004                                 
Symbol
exosc10
Name
(RefSeq) exosome complex component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    394064 (exosc10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    394064 (exosc10)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     394064 (exosc10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 394064
NCBI-ProteinID: NP_957383
ZFIN: ZDB-GENE-040426-781
Ensembl: ENSDARG00000037708
UniProt: F1Q5Q7
LinkDB
Position
23:16313700..16345659
AA seq 899 aa
MAASSSSAAVAKQSDHSPSAEETEAETEFCPGFKDVDTFVKHGLGAVVSATKASAALPSA
GDEFDLYRSFSSFQQFCASQGDRLLHCMSQIMQHHGCRSHMRDRNKLTGLEDRFDLVVDA
NDAILEKVGILLDEASGVSRSQQPVMPAGYQPPKIIVSSWNRKGGGSRAQTFQLLAAKNI
QRPQLKFRDKVDNSNTPFLSKIFIKPNAVKPLPSYFADKHIRKERPEDLDVPAALADFIH
QQRTKEHVDDMFSHPYQYELDHLVMPENLKCKPEVQMYKPIDETPCQFISTLEDLVALNE
KLAKTTEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMYILNETFTDPAIV
KVFHGADSDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLDHLLKVYCDVSSDKRYQLA
DWRIRPLPDEMLKYAQADTHYLLYVYDRVRADLFDGGNGQATLIQQVWTKSRDLSLKKYV
KPIFTEDSYMELYRKQKKSFNTQQLAAFRLMYAWRDKLAREEDESTGYILPNHMMMKIAD
ELPKEPQGIIACCNPTPPLVRQQINELHQLIKQARETPLLKAEVVAQKRKSMTPKRKPQS
TLFGPHDTSRSSESDFLDLSSFETPTKPGMLFSEEDEESVDREKKSVHGLTAPAKISLFA
EDVSPASAHLTVAQQKSHSIMESFENPFRMYLPSKDIHISKNAKYDPSSKIYEIHNRWKL
QSIEQQQKEAQAKQQAKEQAKKAQEERKKAKQTYQESLQNVHTVREQVKEAKQAGQKRER
AASDVSEDSLKPNVKLSKSEGETTVADQSTKPAKKKQKQKTAQEPEAPKQDFKPYDYSQS
NFKLFAGKSKDGSHFDPNRQGPKQKKNLKGQKKGGGGGRSMSYVPAKSDRGFRHNWPKR
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggcggcctcctcgagcagcgctgccgtggccaaacagagcgaccattctccatcagca
gaggaaacagaggcagaaactgagttttgtccgggctttaaagacgtcgacacatttgtc
aagcatggtcttggagcggtggtgtccgccaccaaagcctctgctgctcttccatcagcg
ggagatgagtttgatctgtaccgcagtttctcctccttccagcagttctgcgcctcacaa
ggagaccgactcttacactgtatgagccagataatgcagcaccatggctgtagatcccac
atgagagaccggaacaaactgactggactggaggaccgctttgacctggtggtggacgca
aatgatgccatcctggagaaagtggggattctcctggatgaggcctccggtgtaagtcgc
tcccagcagccagtgatgcctgcaggatatcaaccacccaaaatcattgtgtctagctgg
aatcgcaagggtggaggtagccgagcccagacctttcaacttctagctgccaaaaacata
cagcggccacagctcaagttcagagataaagtggacaacagcaacactccgtttctcagt
aaaatcttcatcaaacccaacgcagtcaaacctctgccctcatattttgccgacaagcac
attcgcaaggagaggccggaggatctagatgtccctgctgctctggcagattttattcat
cagcagaggacaaaagagcacgtggacgacatgttttcccacccatatcagtatgaattg
gaccatctggtcatgccagagaatctgaagtgtaaacctgaagtccagatgtataaacct
attgacgaaaccccttgtcagtttatcagtactttagaagacctcgttgctttgaatgag
aaattggccaagaccactgagttcgctgtggatctggagcatcattcctacagaagcttt
ctgggaatcacatgtttgatgcagatttccacacgagaggaggatttcatcatagacacg
ctagagctacgcagcgagatgtacatcttaaacgagactttcacagaccctgctattgtg
aaggtgtttcatggggccgactctgatattgagtggctgcagaaggactttgggctttat
gtggtcaacatgtttgacactcatcatgctgcacgctgtcttaacctcggccgcaactct
cttgatcatctcctgaaagtatactgtgacgtgagctctgataaacgctaccagctggca
gactggaggatacggccgttgccagatgagatgttgaagtatgctcaggctgacactcac
tacctgctgtacgtgtatgatcgggtcagagcagatctgtttgatgggggcaacgggcag
gccaccctcattcagcaggtctggactaaaagcagagacctttcgctcaagaaatatgtg
aagcctatttttacggaggactcatacatggagttgtaccgcaagcagaagaagagcttt
aacacacagcagctggcagccttcagactgatgtacgcctggagagacaaactggcccga
gaagaagacgagagcactgggtacatcttaccaaaccacatgatgatgaaaattgcagat
gagcttccaaaggagcctcagggcatcatcgcatgctgtaaccccactccaccactagtg
cgtcagcagatcaacgagcttcatcagctcatcaaacaggccagagagactccgttactg
aaggcagaggtagtagctcaaaagaggaaatcaatgacccctaaacgaaagccacagtct
actttattcggaccccatgacacgtcacgctcctctgaaagtgacttcctggacctttct
tcttttgaaaccccaaccaaacctggaatgctgttctcagaggaagatgaggaaagtgtg
gatagagagaaaaaatcagtgcatggtctgactgctccagcaaaaatcagtctatttgcg
gaggatgtgtctccagcttcagctcatctgactgtagcgcagcagaaatctcacagcatc
atggagtcttttgaaaaccccttcagaatgtatttgccatctaaggacattcacatatca
aagaatgccaaatatgacccctcttcaaagatctatgagattcataaccggtggaaactg
cagagtattgagcagcagcagaaagaggctcaggccaaacagcaagctaaagaacaggcc
aagaaagctcaagaggaacgaaagaaagccaaacagacctaccaagagtcgcttcagaac
gttcacaccgtcagagagcaagtgaaggaagcaaagcaggctggacagaaaagagaaaga
gctgcaagtgatgtcagcgaagacagtcttaaaccaaacgtcaaactctcaaagagcgaa
ggtgagacaacggtggctgatcagtctacaaaacctgcaaagaagaaacagaaacagaaa
acggctcaggagcccgaagctcccaaacaagactttaaaccttacgactacagtcagtcc
aatttcaaattattcgccggtaaatcaaaagacggctcacactttgatccaaacagacaa
ggacccaagcagaagaaaaacctaaaaggacagaagaagggcggagggggaggccggagc
atgtcttatgttcccgccaaatctgacagaggatttcggcacaactggcccaagagatag

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