KEGG   Danio rerio (zebrafish): 394101
Entry
394101            CDS       T01004                                 
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    394101 (rapgef1b)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    394101 (rapgef1b)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 394101
NCBI-ProteinID: NP_001315275
ZFIN: ZDB-GENE-040426-1001
Ensembl: ENSDARG00000015971
UniProt: E7F4B2
LinkDB
Position
21:4116444..4223569
AA seq 1188 aa
MSGKIESKHESQKSHLSSFTMKLMKFHSPKIKRTPSKKGKQLQPEPAVKTPEKPVNKKVS
RLEEQEKDVVSALRYFKTIVDKMNVDTKVLQMLPGSASKVLEAILPLMQVEARIQHSSAM
SSCHNRVYQSLATLIRWSDQVMLEGIDLDDKDTVTTVTTVIKAVLDGVKELVKLTIEKHD
QPSPTSPSKPAPPVAKTESGCENPLTEREKAILSKTTPIVTPTDSLTDMSEEEAPPKPPL
PGPKLAEHRNRMQLCSDPVTGQRRATMMETPPALPPKKRQSAPSPTRVAVVAPMSRGPCS
LSLPPGALRQQQDFDVDLLQRRFSGGSQSYDGESPRLSPCNSMGKLSKSDEQLSSLERDS
GQCSRNTSCETLEGYDPDYDFLNQDLSVSEPLPFPTNTGGSLSPLPECNTESQSLSPAHI
PARPRFSAPVTNQASLDYWTPPLTPGQGNSVLPPALPQKKRRSAPIISAYPLYERLPSHY
DNLSEEEQPTPPFPLVTPGSPQVNGDGVLQYTDADSPPPLPEKKGKQILQYMQFVEDYSE
PQPSVFYQLPQSESIYEQRRNKRFQEVYGLNDSYSSSDSIPASAADPHERVPPPALPPKL
RQLASNTTTFPPSSSSSAFSTLPPPAGLPEEVEPALGLSLSVSSSFLSGHASLTTPVSSE
PVGLTNSGRALDGGGVSNGSLTSSLLSLAVCLPSESSLSDSLLTSASESIDESGEGEYVN
LYSSTQANGENTHRTESLSCDDVLQDHSPHIPSSNSKEALTKERPKEASHGHIDDVDELS
LIDHNDIMNRITLKAENDDGPDVRAGSVDILLVHATETDRKDLVLYCEAFLTTYRTFITP
EDLIKKLHHRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRQLMDLVFRL
VCNGELSLARVLRKNILDKVEQKRLLQHMHTLRPLAALGVSARPGTLHDFRSHEIADQLT
LLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKL
LLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRA
YRAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSKRWQQFNILDSMRRFQQVH
YDLKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNISRRRTEREEKT
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgtcggggaaaatagaaagcaagcacgaatcccagaagtctcacctgtcgtccttcacg
atgaaactgatgaagtttcattccccgaagattaaacggaccccatctaagaaaggcaaa
caactccagcctgagcctgcagtgaaaacgccagagaagccagtcaacaagaaggtgagt
cgactggaggaacaggagaaggatgtggtcagcgctctgagatactttaagacgattgtg
gacaagatgaacgttgacaccaaagttctccagatgcttcctggttcggctagtaaagtt
ttagaggctattttgcctctgatgcaggtcgaggctcggatacagcacagctccgccatg
tcctcctgtcacaaccgtgtttatcagagcttggcgactctgattcgctggtccgaccag
gtgatgctggagggcatcgacctcgacgacaaggacactgtgacgactgttaccacggtg
atcaaagctgtgctggatggtgtgaaggagcttgtgaaactcactatagagaaacatgac
caaccgtccccaacatcccccagcaaaccagcgcctcctgtggccaaaacagagagtggg
tgtgaaaatcctctaaccgaaagagagaaggccatcctgagtaagaccacgcccattgtc
acgcccactgacagcttgactgacatgtcagaggaggaggctccacccaaacctcctcta
ccaggacccaaactagcagagcacaggaacaggatgcagttgtgctccgatcctgttacc
gggcagcggagggctacgatgatggaaactccaccggctctgcctccgaagaagcgtcag
tcggccccgtcacccacccgtgtggcagtggtggccccgatgagccggggtccgtgtagc
ctcagcctgcctcctggagccctcagacagcagcaggactttgatgtggatctcctccag
aggcgtttctcaggcggcagtcagtcatatgatggagaatctcctcgtctttctccctgt
aacagcatgggaaaactcagcaaatctgatgagcagctttcgtctctggagcgggacagt
ggacagtgctctcgcaacaccagctgtgaaacgcttgagggatacgatccagattacgac
tttttaaatcaggatctgtccgtctcggaaccgctgccgtttcccaccaacactggcggc
agtctgagccctcttccagagtgcaacactgagtctcaatctctaagccccgcccacatc
cctgcacgcccacgcttcagcgctccagtaaccaatcaggcctccctagactactggact
ccacccctcacacctggacagggtaatagcgtgcttccccctgccctcccacagaagaag
cgccgctctgcaccaatcatatcggcgtatcctctgtacgagcgcctcccgtcacactac
gataacctatcagaggaggagcagccgacgccgccgtttccactggttacaccggggtcg
ccgcaggtcaacggagacggtgttttacagtacacagacgctgacagtccaccgcctctg
ccggagaaaaagggcaaacagatcctgcaatacatgcagtttgtggaggattactctgag
ccgcagccgtccgtcttctaccagctgcctcagagcgagagtatttacgagcagcgcagg
aacaagcgctttcaggaggtttacggcctcaacgactcctacagcagctccgactccatt
cctgcttcagctgcagatccgcacgaacgggtcccaccaccagcgctgcctccaaaactc
agacaactggcctccaacactactacttttcctccttcatcctcctcttctgctttttca
actcttcctcctcctgctgggcttccggaggaggtggagcctgctcttggtctcagccta
tcagtgtctagctctttcctcagtggccacgcctctttgaccactcctgtgagttccgag
ccggttggcttgaccaatagcggcagagctctggatggtggaggtgtctcaaacgggtct
ttgaccagctctctgctctctctggctgtctgtcttccttctgagtcgtctctctctgac
tcgcttcttacctcagcgagcgaaagcattgatgaaagtggtgaaggagaatatgtaaac
ctgtactcgtccacacaggccaacggagaaaacacacaccgcactgaatctttatcatgt
gacgatgtgcttcaagaccactcccctcacattccctcgtccaatagcaaggaggctctg
actaaggagaggccgaaggaagccagtcacggccacattgatgatgtggatgaattatcc
ctgattgatcataatgacatcatgaaccgcatcacactcaaagcagagaatgatgatggt
cctgatgtgagagctggatctgtagacatactgttagttcacgctacagaaacagaccgc
aaagatttggtgttgtactgcgaggcgtttctcacaacctacagaaccttcataacacca
gaagacctcattaaaaagctacaccacagatatactcgcttctgccacagtccagacacc
tttaagaagcgtgtcagtaaaaacaccttctttgtcctggtgagagtcgtggatgaactt
tgtctggtagagttgaccgaggacatcctgcggcagttgatggatctggtgtttcggctg
gtctgtaacggtgaactgagtctggcgagagtcctgcggaaaaatatcctggataaagtg
gagcagaagagactcctgcagcacatgcacacactcaggcctctggcggcactcggcgtc
tctgccaggccaggaacactgcatgatttccgcagtcatgagatcgccgatcagctaacg
ttgctggacgcagaactcttttacaagattgagattcctgaagtcctgctttgggcaaag
gagcagaacgaagagaaaagtccaaatctgacacagtttacagagcactttaacaacatg
agctactgggtgcgctctataatcatccagcaggagaaagctcaggacagagagaagcta
ctgctcaaattcatcaaaatcatgaagcacttgcgtaagctgaataacttcaactcttac
ctggcgattctctcggctctggactctgcaccgatcagacggctggagtggcagaaacag
acgtctgagggtttggaggaatactgcactctcatcgacagctcttcgtcattcagagca
tacagagcagcgttggcggaagttgagcctccatgtataccttacctcggtttgatcctg
caggatctgacgtttgttcatctgggaaacccggattttatagaggggaaagtgaatttc
tccaagcgctggcagcagttcaacattctggacagcatgagacgcttccagcaagtacac
tacgacctgaagcgaaacgacgacatcgtctcgttcttcaacgactttagcgatcacctg
gcggaggaggcattatgggaactctcgctcaagatcaaaccccgaaacatctcgcggcgc
aggacggagcgagaggagaagacctag

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