Danio rerio (zebrafish): 394101
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Entry
394101 CDS
T01004
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
394101 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
394101 (rapgef1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
394101
NCBI-ProteinID:
NP_001315275
ZFIN:
ZDB-GENE-040426-1001
Ensembl:
ENSDARG00000015971
UniProt:
E7F4B2
LinkDB
All DBs
Position
21:4116444..4223569
Genome browser
AA seq
1188 aa
AA seq
DB search
MSGKIESKHESQKSHLSSFTMKLMKFHSPKIKRTPSKKGKQLQPEPAVKTPEKPVNKKVS
RLEEQEKDVVSALRYFKTIVDKMNVDTKVLQMLPGSASKVLEAILPLMQVEARIQHSSAM
SSCHNRVYQSLATLIRWSDQVMLEGIDLDDKDTVTTVTTVIKAVLDGVKELVKLTIEKHD
QPSPTSPSKPAPPVAKTESGCENPLTEREKAILSKTTPIVTPTDSLTDMSEEEAPPKPPL
PGPKLAEHRNRMQLCSDPVTGQRRATMMETPPALPPKKRQSAPSPTRVAVVAPMSRGPCS
LSLPPGALRQQQDFDVDLLQRRFSGGSQSYDGESPRLSPCNSMGKLSKSDEQLSSLERDS
GQCSRNTSCETLEGYDPDYDFLNQDLSVSEPLPFPTNTGGSLSPLPECNTESQSLSPAHI
PARPRFSAPVTNQASLDYWTPPLTPGQGNSVLPPALPQKKRRSAPIISAYPLYERLPSHY
DNLSEEEQPTPPFPLVTPGSPQVNGDGVLQYTDADSPPPLPEKKGKQILQYMQFVEDYSE
PQPSVFYQLPQSESIYEQRRNKRFQEVYGLNDSYSSSDSIPASAADPHERVPPPALPPKL
RQLASNTTTFPPSSSSSAFSTLPPPAGLPEEVEPALGLSLSVSSSFLSGHASLTTPVSSE
PVGLTNSGRALDGGGVSNGSLTSSLLSLAVCLPSESSLSDSLLTSASESIDESGEGEYVN
LYSSTQANGENTHRTESLSCDDVLQDHSPHIPSSNSKEALTKERPKEASHGHIDDVDELS
LIDHNDIMNRITLKAENDDGPDVRAGSVDILLVHATETDRKDLVLYCEAFLTTYRTFITP
EDLIKKLHHRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRQLMDLVFRL
VCNGELSLARVLRKNILDKVEQKRLLQHMHTLRPLAALGVSARPGTLHDFRSHEIADQLT
LLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKL
LLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRA
YRAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSKRWQQFNILDSMRRFQQVH
YDLKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNISRRRTEREEKT
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagaaagcaagcacgaatcccagaagtctcacctgtcgtccttcacg
atgaaactgatgaagtttcattccccgaagattaaacggaccccatctaagaaaggcaaa
caactccagcctgagcctgcagtgaaaacgccagagaagccagtcaacaagaaggtgagt
cgactggaggaacaggagaaggatgtggtcagcgctctgagatactttaagacgattgtg
gacaagatgaacgttgacaccaaagttctccagatgcttcctggttcggctagtaaagtt
ttagaggctattttgcctctgatgcaggtcgaggctcggatacagcacagctccgccatg
tcctcctgtcacaaccgtgtttatcagagcttggcgactctgattcgctggtccgaccag
gtgatgctggagggcatcgacctcgacgacaaggacactgtgacgactgttaccacggtg
atcaaagctgtgctggatggtgtgaaggagcttgtgaaactcactatagagaaacatgac
caaccgtccccaacatcccccagcaaaccagcgcctcctgtggccaaaacagagagtggg
tgtgaaaatcctctaaccgaaagagagaaggccatcctgagtaagaccacgcccattgtc
acgcccactgacagcttgactgacatgtcagaggaggaggctccacccaaacctcctcta
ccaggacccaaactagcagagcacaggaacaggatgcagttgtgctccgatcctgttacc
gggcagcggagggctacgatgatggaaactccaccggctctgcctccgaagaagcgtcag
tcggccccgtcacccacccgtgtggcagtggtggccccgatgagccggggtccgtgtagc
ctcagcctgcctcctggagccctcagacagcagcaggactttgatgtggatctcctccag
aggcgtttctcaggcggcagtcagtcatatgatggagaatctcctcgtctttctccctgt
aacagcatgggaaaactcagcaaatctgatgagcagctttcgtctctggagcgggacagt
ggacagtgctctcgcaacaccagctgtgaaacgcttgagggatacgatccagattacgac
tttttaaatcaggatctgtccgtctcggaaccgctgccgtttcccaccaacactggcggc
agtctgagccctcttccagagtgcaacactgagtctcaatctctaagccccgcccacatc
cctgcacgcccacgcttcagcgctccagtaaccaatcaggcctccctagactactggact
ccacccctcacacctggacagggtaatagcgtgcttccccctgccctcccacagaagaag
cgccgctctgcaccaatcatatcggcgtatcctctgtacgagcgcctcccgtcacactac
gataacctatcagaggaggagcagccgacgccgccgtttccactggttacaccggggtcg
ccgcaggtcaacggagacggtgttttacagtacacagacgctgacagtccaccgcctctg
ccggagaaaaagggcaaacagatcctgcaatacatgcagtttgtggaggattactctgag
ccgcagccgtccgtcttctaccagctgcctcagagcgagagtatttacgagcagcgcagg
aacaagcgctttcaggaggtttacggcctcaacgactcctacagcagctccgactccatt
cctgcttcagctgcagatccgcacgaacgggtcccaccaccagcgctgcctccaaaactc
agacaactggcctccaacactactacttttcctccttcatcctcctcttctgctttttca
actcttcctcctcctgctgggcttccggaggaggtggagcctgctcttggtctcagccta
tcagtgtctagctctttcctcagtggccacgcctctttgaccactcctgtgagttccgag
ccggttggcttgaccaatagcggcagagctctggatggtggaggtgtctcaaacgggtct
ttgaccagctctctgctctctctggctgtctgtcttccttctgagtcgtctctctctgac
tcgcttcttacctcagcgagcgaaagcattgatgaaagtggtgaaggagaatatgtaaac
ctgtactcgtccacacaggccaacggagaaaacacacaccgcactgaatctttatcatgt
gacgatgtgcttcaagaccactcccctcacattccctcgtccaatagcaaggaggctctg
actaaggagaggccgaaggaagccagtcacggccacattgatgatgtggatgaattatcc
ctgattgatcataatgacatcatgaaccgcatcacactcaaagcagagaatgatgatggt
cctgatgtgagagctggatctgtagacatactgttagttcacgctacagaaacagaccgc
aaagatttggtgttgtactgcgaggcgtttctcacaacctacagaaccttcataacacca
gaagacctcattaaaaagctacaccacagatatactcgcttctgccacagtccagacacc
tttaagaagcgtgtcagtaaaaacaccttctttgtcctggtgagagtcgtggatgaactt
tgtctggtagagttgaccgaggacatcctgcggcagttgatggatctggtgtttcggctg
gtctgtaacggtgaactgagtctggcgagagtcctgcggaaaaatatcctggataaagtg
gagcagaagagactcctgcagcacatgcacacactcaggcctctggcggcactcggcgtc
tctgccaggccaggaacactgcatgatttccgcagtcatgagatcgccgatcagctaacg
ttgctggacgcagaactcttttacaagattgagattcctgaagtcctgctttgggcaaag
gagcagaacgaagagaaaagtccaaatctgacacagtttacagagcactttaacaacatg
agctactgggtgcgctctataatcatccagcaggagaaagctcaggacagagagaagcta
ctgctcaaattcatcaaaatcatgaagcacttgcgtaagctgaataacttcaactcttac
ctggcgattctctcggctctggactctgcaccgatcagacggctggagtggcagaaacag
acgtctgagggtttggaggaatactgcactctcatcgacagctcttcgtcattcagagca
tacagagcagcgttggcggaagttgagcctccatgtataccttacctcggtttgatcctg
caggatctgacgtttgttcatctgggaaacccggattttatagaggggaaagtgaatttc
tccaagcgctggcagcagttcaacattctggacagcatgagacgcttccagcaagtacac
tacgacctgaagcgaaacgacgacatcgtctcgttcttcaacgactttagcgatcacctg
gcggaggaggcattatgggaactctcgctcaagatcaaaccccgaaacatctcgcggcgc
aggacggagcgagaggagaagacctag
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integrated database retrieval system
