Danio rerio (zebrafish): 394107
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Entry
394107 CDS
T01004
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
394107 (tial1)
03041 Spliceosome [BR:
dre03041
]
394107 (tial1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
394107 (tial1)
Spliceosome [BR:
dre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
394107 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_10
RRM_Nup35
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Rodlin
Motif
Other DBs
NCBI-GeneID:
394107
NCBI-ProteinID:
NP_957426
ZFIN:
ZDB-GENE-040426-1547
Ensembl:
ENSDARG00000009525
UniProt:
Q7SXQ1
LinkDB
All DBs
Position
13:complement(28689934..28702663)
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AA seq
370 aa
AA seq
DB search
MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
KISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK
SVQDNSAKQLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPFGQIMEIRVFPEKG
YSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMAKNVQPMEYGQWGQWNQMYG
NPQQYGQYMTNGWQVPSYGMYGQTWNQQGFGVEQSQSPAWVGGFGTQPSQAQPGAVMNQA
NFGMAGYQTQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagagccacccaaaaaccctctatgtggggaatctttcaagagatgtaacg
gagaacttgatcctacagttatttactcagattgggccatgtaaaagttgtaaaatgata
acagagcatacaagcaatgacccgtattgctttgtggagttctttgaacatagagacgct
gctgcggcattagctgccatgaacggaaggaagattttgggaaaggaagtcaaggtaaac
tgggctaccactccgagcagtcagaagaaagatacatcaaatcattttcatgtttttgtg
ggagacttgagccctgagatcacaactgatgacatcagagctgcatttgccccctttggg
aaaatctcggatgcacgagtggtgaaggatatgacaacagggaaatcaaaggggtatgga
tttgtgtccttctataacaaactggatgctgagaacgccatagtacacatgggaggtcag
tggcttggtggacgacaaatccggactaactgggcaactcgcaaaccacccgctccaaag
agtgtgcaagacaatagtgccaagcagctaagatttgatgaggtggtgaaccagtcgagt
cctcagaactgcacagtttactgtggtggcattcagtcaggactcacagagcatctcatg
cgacagaccttttctccttttggccagataatggagatcagagtgtttccagagaagggt
tattcttttatcaggttctcttcacatgaaagtgctgctcatgccattgtctccgtgaat
ggcaccaccattgaaggacatgtggtgaagtgctactggggcaaagaatctcctgacatg
gccaaaaatgtccagccgatggagtacggtcagtggggacaatggaatcaaatgtatggc
aatccgcaacagtatggtcagtacatgaccaatggctggcaagtaccatcctatggaatg
tacggccaaacatggaatcagcaaggatttggtgtcgaacaatcacagtcccctgcctgg
gtgggaggttttgggacgcaaccctctcaggctcagcccggtgcagtgatgaaccaggct
aacttcggcatggccggataccagacacagtga
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