KEGG   Danio rerio (zebrafish): 394165
Entry
394165            CDS       T01004                                 
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    394165 (nelfcd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    394165 (nelfcd)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     394165 (nelfcd)
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 394165
NCBI-ProteinID: NP_957484
ZFIN: ZDB-GENE-040426-720
Ensembl: ENSDARG00000021097
UniProt: Q7ZVZ0
LinkDB
Position
6:complement(49782380..49801132)
AA seq 579 aa
MDEEYYSHAGEWEAQDGSMEDGYGDAEADGKVQEDCLQKFSSRDYIMEPTVFNTLKSYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEQNLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAMRRIGQEVQKYAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAGLSTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQME
LKKTLLDRMVHLLSRGYVLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGENDPVAEFIAHCKSNFIMMN
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggacgaagaatactacagccatgcaggagaatgggaagcacaagacggcagcatggag
gatggatacggggatgctgaggctgacggaaaagttcaggaagattgtttgcagaaattc
tccagcagagactacatcatggagcccaccgtgtttaacaccctgaaatcgtatttccag
gcaggtggttcacctgagcatgtgattcagctcctctcggagaattactctgctgtcgca
cagaccgtcaatctgctggccgagtggctcattcaaatgggtgtggagcccgctcaggtg
caggagcgtgtagagaatcatttaaagagtctcttgatcaaacattttgaccctcagaaa
gcagactctattttcactgtggagggagagacacctgcatggctggagcagatgatagct
cacacaacatggagagacctgttctataaactagctgaagctcatccagactgtctgatg
cttaactttaccgtcaagttgatttcagatgccggataccaaggagagatcacaagcgtt
tccacagcctgccaacagctggaggttttctccagagtcctgcgcacctctctggccaca
ctgctggacggaggagaacaaaacctggagaaaaatctgcctgaatttgcgaaaatggtg
tgtcacggtgaacacacatacttattcgctcaggccatgatgtccatccttgctcaggag
gagcagggcgggtcagcaatgaggcgaatcggacaggaagtacagaagtatgcccatgag
aggggacatgatgccagtcagatcacattggcgctgggcacggctgctgcatatccgcgt
gcatgccaggctcttggtgccatgctgtccaaaggggctctgaacccagcagacatcaca
gtcctgttcaagatgttcagcagtatggatccgcctcctgtagagctgattcgagttcct
gccttcttagatctgttcatgcagtcactattcaaacccggagctaaaatcaaccaagac
cacaagcacaaatacatacacatattagcgtacgccgctagtgttgtggagacatggaaa
aagaacaaacgagtgaatataaataaggacgagctcaagtcgacttctaaggccattgag
actgttcataatctctgctgcaatgaaaacaaaggagccactgagctagtagcagggctc
agcacgttataccagtgcataaggtttccagtggtggccatgggagtgctgaagtgggtg
gactggacggtgtctgagcctcgttactttcagttacaaactgaccacactcctgtccat
ctggctctgctggatgagatcagcacctgccatcagcttctccatcctcaggtgctgcag
ttgctgatcaagctgtttgagaccgaacactcgcagcttgacgtcatggagcagatggag
ctcaagaagaccctgctggaccgcatggttcacctgttgagtcgaggttatgttcttcct
gtcgtcggctacatccgcaaatgtcttgaaaagctcaacactgatatttcactcatcaga
tattttgttacggaggttctggacgtgatagcgcctccatatacctcagactttgtccag
ctgtttttgccgatcctagaaaacgacagcatagcaggaacaatccgcacagaaggagaa
aacgatcctgtggccgagttcattgctcactgcaaatccaacttcatcatgatgaactaa

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