KEGG   Danio rerio (zebrafish): 394176
Entry
394176            CDS       T01004                                 
Symbol
pum1
Name
(RefSeq) pumilio homolog 1
  KO
K17943  pumilio RNA-binding family
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: PUF PUF_NOP9 CFAP61_N
Other DBs
NCBI-GeneID: 394176
NCBI-ProteinID: NP_001264048
ZFIN: ZDB-GENE-030131-2074
Ensembl: ENSDARG00000099256
UniProt: A0A0R4IWL6 S6B5C2 Q7SXY5
LinkDB
Position
19:43037657..43089455
AA seq 1152 aa
MSVACVLKRKAVLWQDSFSPHLRLPPPDRPLPSMPVVLSAAGHTPQPGPSPQAPAPTQGA
GRSQDDAMVDYFFQRQHGDQPGYNNCKHRWPTGDNIHADNQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVQRRPGQGFHGV
GEAGSVLSPRSESGGLGVSMVEYVLSSSPAEKMDSCLRKGAYGPRDSEADDPEKRVEQKP
KTTFDPERKELKETEPDVLDNPNGLPNQNGLDVDVKDFSRTPGNCPPTGQEVELGGPEMV
GGAGPKPAEEFSNVETQNVTLDPMESVSMETLQFEYPGGQLPLDSTAATVGLFDYNSPQQ
LFQRPNALAVQQLTAAQQQQYALAAAQQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAATPSNSANQQSAAQNQQNQQQVMRAGGN
QRPLTPSQGQQGQQTEQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVVNT
GARGGPVRLMAPASVIISPSAAVAAAAASAGGANAGLGGGASGAFRALSSQQAPGQQGSG
ALGGSSFYGSGSPSSSSQSSSLFSQGSAQPGNTSLGFNANPTSSLGATLGAALGGFGTAV
ANSSSSGSRRDSLTGSSDLYKRTASSLTPIGHGAFYNGLSFSSSPGPVGMPLPNQGPSHS
LTPPPSLSTHGSSSSLNLGGLTNGSGRFISAAPGAEAKYRSATTGSSLFSPSSQLFPSSR
LRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASPA
ERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCR
VIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFK
GQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGR
AEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYT
MMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVD
LGPLCAPPNGIM
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgagcgtagcgtgtgtgttgaagaggaaagctgtgctctggcaggattcgttcagcccc
cacctgagactgcctccccctgacaggccattacccagcatgcctgtggtgctgagtgct
gcgggccacacccctcaacccggcccttctcctcaggcccctgccccgacacagggagcc
ggacgatcgcaagatgacgcaatggtggattatttctttcagcggcagcacggggaccag
cccggatacaacaactgcaaacaccgctggccgaccggcgacaatattcatgcagacaac
caggtacgatccatggatgagctaaatcatgacttccaggcactggcactggagggtcgg
gccatgggagagcagctccttactgggaagaagttttgggaaactgatgattcagggaaa
gatggaccaaaagggatctttctggaccagtggagagacagcgcttggggagcctctgat
cactcagtgtctcagccaatcatggtgcagcgccgaccgggtcagggcttccacggagtg
ggagaggcgggatctgtgctgtcgccgcggtccgagagcggtgggttaggggtttccatg
gtggagtatgtgctcagctcctcacctgctgagaagatggactcgtgtctgcgcaaagga
gcctatggtccaagagattcagaggctgatgaccctgagaaaagggtggaacaaaaaccc
aagacaacgtttgaccccgaacgaaaggaactgaaggagaccgaaccagatgttttggat
aatcctaatggactgcccaatcagaatggacttgatgtggatgttaaagattttagtcgg
acccctggaaattgccctccaactggtcaagaggtggagttgggaggaccagagatggta
ggaggtgcagggccgaaaccagccgaggagttttcaaatgttgaaacccaaaatgtgacc
ctggaccccatggagtcagtgtctatggagactttgcagttcgagtaccctggaggacag
ttgccgcttgactccacagctgctaccgtcggcctgtttgactacaactcccctcagcag
ctgttccagagacccaatgctctggcagtccagcagctgaccgcagcccagcagcagcag
tacgcgctcgccgcagcccaacagccacacattggtttggctccagctgcatttgtaccg
aatccgtacatcatcagcgctgctccgcccggcaccgacccgtatgctgcaggactcgct
gctgccgccactctaggcccagcggtgatgccccctcagtactatggagtgactccatgg
ggagtgtatcctgccaacctgttccagcagcaggctgccacgccatccaactcggccaac
cagcagtcagcagcgcagaaccagcagaaccaacagcaggtgatgcgtgcaggtggaaac
cagcgacctctcactccaagtcaaggacagcagggtcagcagacggagcagctcgtagcg
gcagcagctgtgaactcggcattggcttttgggcagggtctggcagcaggtgtaccaggt
tatccagtgttggctcctgctgcatattatgaccagacaggtgcacttgtggtgaataca
ggagctcgtggaggacccgttcgacttatggcccccgcatcagtaatcatcagcccatca
gccgcagtggctgctgccgccgcttcagcaggaggggcgaatgcaggtctcggtggtgga
gccagcggtgcgtttcgtgcattgagttcccagcaggctcctgggcagcaagggagcggg
gctttgggaggaagctctttttatgggagcggatctccgagctcctcttcacagagctcc
tccctgttctcccaaggctccgctcagccgggaaacacctcactcggattcaatgccaac
ccaacatcatctctcggagccacgcttggagcagcactcgggggttttggcacggcagtg
gctaattccagttccagcgggtctcgtcgggattctctgacgggcagctctgatctgtac
aagcggacagccagcagcctcactcctattggccatggagccttttacaacggcctcagc
tttagctcctcccctggtccggttggcatgccacttccaaaccaaggcccctcccactct
ctcaccccgccaccctcgctctcaactcatggatcctcaagcagtcttaatcttggtgga
ctgaccaatggcagtgggcgcttcatctcagcagcacctggagcggaggcgaagtaccgc
agcgccaccaccggctcgtctctctttagtcccagcagtcagctcttcccctcgtcacgt
ctgcgctacgggatgtctgacgtgatgccgtcgggacgcagccgtctgctggaggacttc
agaaacaaccgctaccccaacctgcagctgagagagatcgcaggacacgtcatggagttc
tctcaggaccagcacggctccaggtttattcagctgaaattggagagagcaagtcctgca
gagcgtcagctggtcttcaatgagatcctgcaggccgcctaccagctcatggttgatgtg
tttggaaattatgtcatccagaagttctttgagtttggcagtctggatcagaagctggcg
ctggccgagcggattcgtggtcatgtgttatccctggcgctgcagatgtacggctgcaga
gtcattcagaaagccctggagttcatcccctccgaccagcaagtcattaatgagatggtt
cgggagctcgacggacacgtgttaaagtgtgtgaaggatcaaaacggcaatcatgtggtg
cagaaatgcattgagtgtgttcagcctcatgctcttcagttcatcattgatgccttcaaa
ggacaggtgtttgctctgtccacacacccatatggctgtcgggtgatccagcgtattctg
gagcactgcctgcccgagcagactttatccatcctggaggaaatccatcagcacactgag
cagctggtgcaggatcagtatgggaattatgtaatccagcacgtgttggagcacggccgc
gctgaggacaagagcaagattgtatctgaaatccgaggaaatgttttggggctcagccag
cataagtttgccagtaatgtggtggagaagtgtgtgacccactctctgcgtgccgaacgg
gccatgctgatcgatgaggtgtgcagtatggcggacgggccacacagtgccttatacacc
atgatgaaggaccagtacgcaaactatgttgtgcagaagatgatcgatgtggccgagcca
acacaacgaaagattgtaatgcacaagatccggccccatattgcgacgctgaggaagtac
acgtacggaaagcacattttggccaagctggagaagtactacatgaagaacggtgttgac
ctgggcccgctctgcgctcctcccaatggcatcatgtaa

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