Danio rerio (zebrafish): 394176
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Entry
394176 CDS
T01004
Symbol
pum1
Name
(RefSeq) pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
dre
Danio rerio (zebrafish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
394176
NCBI-ProteinID:
NP_001264048
ZFIN:
ZDB-GENE-030131-2074
Ensembl:
ENSDARG00000099256
UniProt:
A0A0R4IWL6
S6B5C2
Q7SXY5
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All DBs
Position
19:43037657..43089455
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AA seq
1152 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLRLPPPDRPLPSMPVVLSAAGHTPQPGPSPQAPAPTQGA
GRSQDDAMVDYFFQRQHGDQPGYNNCKHRWPTGDNIHADNQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWETDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVQRRPGQGFHGV
GEAGSVLSPRSESGGLGVSMVEYVLSSSPAEKMDSCLRKGAYGPRDSEADDPEKRVEQKP
KTTFDPERKELKETEPDVLDNPNGLPNQNGLDVDVKDFSRTPGNCPPTGQEVELGGPEMV
GGAGPKPAEEFSNVETQNVTLDPMESVSMETLQFEYPGGQLPLDSTAATVGLFDYNSPQQ
LFQRPNALAVQQLTAAQQQQYALAAAQQPHIGLAPAAFVPNPYIISAAPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAATPSNSANQQSAAQNQQNQQQVMRAGGN
QRPLTPSQGQQGQQTEQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVVNT
GARGGPVRLMAPASVIISPSAAVAAAAASAGGANAGLGGGASGAFRALSSQQAPGQQGSG
ALGGSSFYGSGSPSSSSQSSSLFSQGSAQPGNTSLGFNANPTSSLGATLGAALGGFGTAV
ANSSSSGSRRDSLTGSSDLYKRTASSLTPIGHGAFYNGLSFSSSPGPVGMPLPNQGPSHS
LTPPPSLSTHGSSSSLNLGGLTNGSGRFISAAPGAEAKYRSATTGSSLFSPSSQLFPSSR
LRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASPA
ERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCR
VIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFK
GQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGR
AEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSALYT
MMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVD
LGPLCAPPNGIM
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcgtgtgtgttgaagaggaaagctgtgctctggcaggattcgttcagcccc
cacctgagactgcctccccctgacaggccattacccagcatgcctgtggtgctgagtgct
gcgggccacacccctcaacccggcccttctcctcaggcccctgccccgacacagggagcc
ggacgatcgcaagatgacgcaatggtggattatttctttcagcggcagcacggggaccag
cccggatacaacaactgcaaacaccgctggccgaccggcgacaatattcatgcagacaac
caggtacgatccatggatgagctaaatcatgacttccaggcactggcactggagggtcgg
gccatgggagagcagctccttactgggaagaagttttgggaaactgatgattcagggaaa
gatggaccaaaagggatctttctggaccagtggagagacagcgcttggggagcctctgat
cactcagtgtctcagccaatcatggtgcagcgccgaccgggtcagggcttccacggagtg
ggagaggcgggatctgtgctgtcgccgcggtccgagagcggtgggttaggggtttccatg
gtggagtatgtgctcagctcctcacctgctgagaagatggactcgtgtctgcgcaaagga
gcctatggtccaagagattcagaggctgatgaccctgagaaaagggtggaacaaaaaccc
aagacaacgtttgaccccgaacgaaaggaactgaaggagaccgaaccagatgttttggat
aatcctaatggactgcccaatcagaatggacttgatgtggatgttaaagattttagtcgg
acccctggaaattgccctccaactggtcaagaggtggagttgggaggaccagagatggta
ggaggtgcagggccgaaaccagccgaggagttttcaaatgttgaaacccaaaatgtgacc
ctggaccccatggagtcagtgtctatggagactttgcagttcgagtaccctggaggacag
ttgccgcttgactccacagctgctaccgtcggcctgtttgactacaactcccctcagcag
ctgttccagagacccaatgctctggcagtccagcagctgaccgcagcccagcagcagcag
tacgcgctcgccgcagcccaacagccacacattggtttggctccagctgcatttgtaccg
aatccgtacatcatcagcgctgctccgcccggcaccgacccgtatgctgcaggactcgct
gctgccgccactctaggcccagcggtgatgccccctcagtactatggagtgactccatgg
ggagtgtatcctgccaacctgttccagcagcaggctgccacgccatccaactcggccaac
cagcagtcagcagcgcagaaccagcagaaccaacagcaggtgatgcgtgcaggtggaaac
cagcgacctctcactccaagtcaaggacagcagggtcagcagacggagcagctcgtagcg
gcagcagctgtgaactcggcattggcttttgggcagggtctggcagcaggtgtaccaggt
tatccagtgttggctcctgctgcatattatgaccagacaggtgcacttgtggtgaataca
ggagctcgtggaggacccgttcgacttatggcccccgcatcagtaatcatcagcccatca
gccgcagtggctgctgccgccgcttcagcaggaggggcgaatgcaggtctcggtggtgga
gccagcggtgcgtttcgtgcattgagttcccagcaggctcctgggcagcaagggagcggg
gctttgggaggaagctctttttatgggagcggatctccgagctcctcttcacagagctcc
tccctgttctcccaaggctccgctcagccgggaaacacctcactcggattcaatgccaac
ccaacatcatctctcggagccacgcttggagcagcactcgggggttttggcacggcagtg
gctaattccagttccagcgggtctcgtcgggattctctgacgggcagctctgatctgtac
aagcggacagccagcagcctcactcctattggccatggagccttttacaacggcctcagc
tttagctcctcccctggtccggttggcatgccacttccaaaccaaggcccctcccactct
ctcaccccgccaccctcgctctcaactcatggatcctcaagcagtcttaatcttggtgga
ctgaccaatggcagtgggcgcttcatctcagcagcacctggagcggaggcgaagtaccgc
agcgccaccaccggctcgtctctctttagtcccagcagtcagctcttcccctcgtcacgt
ctgcgctacgggatgtctgacgtgatgccgtcgggacgcagccgtctgctggaggacttc
agaaacaaccgctaccccaacctgcagctgagagagatcgcaggacacgtcatggagttc
tctcaggaccagcacggctccaggtttattcagctgaaattggagagagcaagtcctgca
gagcgtcagctggtcttcaatgagatcctgcaggccgcctaccagctcatggttgatgtg
tttggaaattatgtcatccagaagttctttgagtttggcagtctggatcagaagctggcg
ctggccgagcggattcgtggtcatgtgttatccctggcgctgcagatgtacggctgcaga
gtcattcagaaagccctggagttcatcccctccgaccagcaagtcattaatgagatggtt
cgggagctcgacggacacgtgttaaagtgtgtgaaggatcaaaacggcaatcatgtggtg
cagaaatgcattgagtgtgttcagcctcatgctcttcagttcatcattgatgccttcaaa
ggacaggtgtttgctctgtccacacacccatatggctgtcgggtgatccagcgtattctg
gagcactgcctgcccgagcagactttatccatcctggaggaaatccatcagcacactgag
cagctggtgcaggatcagtatgggaattatgtaatccagcacgtgttggagcacggccgc
gctgaggacaagagcaagattgtatctgaaatccgaggaaatgttttggggctcagccag
cataagtttgccagtaatgtggtggagaagtgtgtgacccactctctgcgtgccgaacgg
gccatgctgatcgatgaggtgtgcagtatggcggacgggccacacagtgccttatacacc
atgatgaaggaccagtacgcaaactatgttgtgcagaagatgatcgatgtggccgagcca
acacaacgaaagattgtaatgcacaagatccggccccatattgcgacgctgaggaagtac
acgtacggaaagcacattttggccaagctggagaagtactacatgaagaacggtgttgac
ctgggcccgctctgcgctcctcccaatggcatcatgtaa
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