Danio rerio (zebrafish): 394190
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Entry
394190 CDS
T01004
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00280
Valine, leucine and isoleucine degradation
dre00650
Butanoate metabolism
dre01100
Metabolic pathways
dre04146
Peroxisome
Module
dre_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
394190 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
394190 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
394190 (hmgcl)
Enzymes [BR:
dre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
394190 (hmgcl)
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Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
394190
NCBI-ProteinID:
NP_957509
ZFIN:
ZDB-GENE-040426-958
Ensembl:
ENSDARG00000021220
UniProt:
Q7ZV32
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Position
17:complement(24855678..24866727)
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AA seq
340 aa
AA seq
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MAALMMRVAPGPFASVRVNRPVLHCAASALIRSVSVSAAASQALPERVKIVEVGPRDGLQ
NEKTIVPTEVKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADQEEVMRGLHKKPGVNYPV
LTPNLKGFQAAVKAGAKEVAIFGAASELFSKKNINCSVEESLVRFEEVMTAAKQEGVSVR
GYVSCVLGCPYEGKVSPSKVAEVAKRLYSMGCYEVSLGDTIGVGTPGGMTEMLNAVKKEL
PVEALAVHCHDTYGQALANILVALQNGVSVVDSSVAGLGGCPYAQGASGNVATEDVVYML
HGLGIHTGVDLPRLLDAGSFICHSINRRTNSKVAQASCKL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcatgatgagagttgctcctggtccttttgcctctgttcgggttaatcga
cccgtcttgcactgtgccgcgtccgccctgatcagatccgtgagtgtgtctgccgctgcc
tctcaggctttaccagagagggtgaagattgtggaggttggacccagagatggacttcag
aatgagaagaccattgttcccacggaggtgaagatccggctcattgatatgctctcggag
gcaggacttcctgtcattgaggccactagttttgtttcacctaaatgggtgcctcagatg
gctgatcaggaggaagtgatgcgtggcctccacaagaaacctggagtgaattaccctgtt
ctgacccctaacctaaagggatttcaggctgctgtaaaagctggtgcaaaagaggtggca
atatttggtgctgcatcagagctcttcagtaagaagaacatcaactgctcggtggaggag
agtcttgtgcgctttgaggaggtgatgacagctgccaaacaggagggcgtttctgtgcga
ggctatgtgtcctgtgtgttgggatgtccatatgaaggaaaggtgtcaccaagcaaagtg
gcagaggttgctaagcgactgtattctatgggctgctatgaggtttcattgggtgacacc
attggagtgggcactccgggcggcatgacggagatgctgaacgctgtgaagaaagagctt
cctgtggaggctttagcagttcactgtcatgacacttatgggcaagcactggcaaacata
cttgtggcattacagaatggggtgagtgtcgtggactcgtctgtcgcagggcttggtggt
tgcccgtatgcccagggggcttctgggaatgtggcaactgaagatgtggtctatatgctg
catggactgggaatccatactggagtggatctgcccagactgttggacgccggttcattc
atctgtcattcaatcaacagaaggaccaattcaaaagtagctcaggcctcctgcaagctc
tga
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