Danio rerio (zebrafish): 394243
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Entry
394243 CDS
T01004
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04144
Endocytosis
dre04517
IgSF CAM signaling
dre04530
Tight junction
dre04810
Regulation of actin cytoskeleton
dre05100
Bacterial invasion of epithelial cells
dre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
394243 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
394243 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
394243 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
394243 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
394243 (arpc1a)
05100 Bacterial invasion of epithelial cells
394243 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
394243 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
394243 (arpc1a)
Membrane trafficking [BR:
dre04131
]
Others
Actin-binding proteins
Arp2/3 complex
394243 (arpc1a)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
394243 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Rax2
Beta-prop_HPS5
RMC1_N
Beta-prop_EML
SH3_3
Beta-prop_SPT8
Beta-prop_EIPR1
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
394243
NCBI-ProteinID:
NP_958500
ZFIN:
ZDB-GENE-040116-1
Ensembl:
ENSDARG00000008383
UniProt:
Q7ZUQ0
LinkDB
All DBs
Position
3:39750840..39759186
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKVHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
APTPWGSKMPFGQVMTEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTISSTPS
QLKTEFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFTSKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcaccagtttttgttggaacccatcacctgccacgcatggaaccgggacagg
acccaaattgctatcagcccaaacaaccacgaagtccatatatacaagaaaagtggaaat
cagtgggtgaaagttcatgaattaaaagaacacaatgggcacatcacaggcattgactgg
gctcctaaaagtgatcgtattgtgacctgtggagcggaccgaaatgcttatgtatggagt
caaaaggacggcgtgtggaaacccacccttgttattctcaggatcaaccgtgctgccacg
tttgtgaaatggtctcctctggagaacaaatttgcagtggggagtggagctcgactcata
tccgtttgctactttgagtctgaaaatgattggtgggttagtaaacacatcaaaaagccc
atccgttcaactgtcctcagtttagactggcatccaaataatgtgcttctggcagctggg
tcatgtgacttcaaatgcagggtgttctctgcatacatcaaggaggtggatgagaaacca
gctccaaccccgtggggttccaaaatgccctttgggcaggtgatgacagagtttggtggg
gcgggaagtggaggttgggttcacagcgtctgtttctctgccagtggaaacagattggct
tgggtcagccatgacagtactgtcactgtagtggaccccacaataagctcaacgccgagt
cagctgaaaaccgaattccttgctcttctgagtgtaacttttgtttctgagaacaacatt
gtggcagcgggtcacgactgctgccctatgctgttcagttttgatgatggtggaaccttg
accttcacctccaagttggacattccaaagcaaagcatccagcgcaacatttctgccatg
gagcgctttcgtaacatggacaagagggccaccactgaggaccgcaatagcaccctagaa
accctgcatcagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaattgacggagcaatgaccatatgggatttcaagacctta
gagtcttcaatccagggcctgcggatcatgtaa
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