Danio rerio (zebrafish): 402838
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Entry
402838 CDS
T01004
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
402838 (rnf20)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
402838 (rnf20)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
402838 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
BRE1
zf-RING_5
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
402838
NCBI-ProteinID:
NP_001243104
ZFIN:
ZDB-GENE-130404-2
Ensembl:
ENSDARG00000016664
UniProt:
F1R926
LinkDB
All DBs
Position
14:complement(25370177..25401029)
Genome browser
AA seq
1013 aa
AA seq
DB search
MSGQKRPSDAGSSATLGAPPEKKKGGEDGEGMSTGSGGSTAVETVIKLGGGANLEEQDIK
ALQIKNRKLGEALDQRQVIEDELRERVETLETRQATDDASLLILNRYWNQFDEHVRLFIR
RCDQSGSEPVESQPPEGRSLKPGTPEPDGDSNQERAKDRGQQGEGVSSFLATLASSTSEE
IDAELQERVESSCKQASRVVEIYENLKNMVDQLKKDLESGKDGGLWDVAVRLNALLTGMN
ERLCQLTDGLQQKHSHMTSESRSLGRAANRADNRISELQGLIEELQWDMEKIRRRENRLN
THLVEVLERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSELQKLQ
QDLQTVYQENTNMKVELLSRAEEVARDSAEYRCLQSQFSVLYNESLVLKSQLDETKARLN
TTRTARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAG
PINREMRHLISTLQTHNQQMKGEVVKYKLRLREAQQELNQLRAAKGNAAVQSQSSTEMDV
KEETVSPLTPAPTTDVTVKTEPDSGSATPSTTGITVKTEPGTDAETVVKEEEKEKEKDKE
KEKEKDKEKEQRERERVTRGSTGSLGVKEERDKAGTSSSQSEDIPVERCAVIGGPKRKEM
EQLKIVRVELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEAEELRQRVRE
LEERERREGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQ
EQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVR
KLEEKERLLQGTISAAERELGLRTQALEMNKRKAQDSVLLSEEVRTQLEGVQQRLRSVRE
EVIENSISREKESFNARRAQEDISKLRRKIEKAKKPAENIRNGDEILNEEINEYKARLTC
PCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcagaagcgccccagtgatgccggcagctctgccgccctcggtgctcctcca
gagaagaagaagggaggtgaagatggagagggtatgagcacggggtcaggaggaagcacg
gctgttgaaactgtcatcaaactgggaggaggggccaacttggaagaacaagatatcaaa
gcactccagattaaaaacaggaagttgggagaagctctagaccaaagacaggtgattgag
gatgaactgagggagcgagttgagacgttggagactcgacaggcaacagatgatgccagt
ttgttgattctaaaccgatactggaaccagtttgatgaacatgtacgattatttatacgt
tgctgtgaccaatcgggcagtgagcctgtggaaagccaacctcctgaggggcggagctta
aaacctggaacaccagaaccggatggagactcaaaccaggagcgtgcaaaagacagaggt
cagcagggggagggagtgagctcttttctggctacactggccagcagcaccagtgaggag
atcgacgcagagctgcaggagcgagtggagtccagctgcaaacaggccagtcgtgtggtg
gaaatttatgagaacctgaagaacatggtggatcagctaaagaaggatctggagtctgga
aaagatggcggtctctgggacgtcgccgtccgcctcaatgccctcctgaccggtatgaat
gagcgtctctgccagctgaccgatggcctccagcagaagcacagtcacatgaccagcgag
tctcgttcactgggccgggcggctaatcgtgctgataacaggatcagtgagctgcagggg
ctcattgaggagctgcagtgggacatggagaagatcagacgccgcgagaatcggcttaac
acacacctggtggaggtgctggaaagggtgaacagtaaaggttacaaggtttgtggtgaa
gcaagcagtgtatgtggaaccatcactatcaacaaaagaaagtttgaagagatgaacagc
gaattagaggagaacagggagctggcggagaatcggctcagtgaactccagaaactccag
caggatcttcagacagtttaccaggagaatactaacatgaaggtggagctgttgtccaga
gctgaggaagtggccagagacagtgcagagtatcgctgtctgcagtctcaattctctgtg
ctctacaatgaatcactggtgctgaaatctcagctggatgagaccaaagcaagactcaac
acgaccaggactgcacggctgcgccagctggaccacatggagaatgatgaggtctccttg
cagcggaaggtccgcactgaagtcattcagctggaagacacattagcacaagtgcgcaag
gagtacgagatgctcaggattgaatttgaacagactttagctgctaatgaacaagcaggc
cccataaaccgagagatgagacatttgatcagtacactgcaaactcataaccagcagatg
aagggtgaggtggtcaaatataaactcagactgagagaggctcagcaagagctcaaccag
ctccgggctgccaaaggcaatgctgctgttcagtctcagtccagcacagagatggatgtg
aaggaggagactgtctctccgcttacccctgccccgaccaccgacgttactgtgaagacg
gagcctgacagcggctctgctacacccagcaccactggtataacagtcaagactgaacca
ggtacagatgcagagactgtggtaaaagaggaggaaaaggagaaggaaaaagacaaagaa
aaggaaaaggacaaagagaaggaacagagagaaagagagcgggtgacgcgtggcagtact
ggaagcttaggggtgaaagaagagagagacaaagctggcacaagcagcagccaatcagaa
gacatcccagttgaacgctgtgctgtaattggagggcctaaacgcaaggagatggagcag
ctgaaaatagtgcgggtggagctgaagaaagctcaagagtcccaaagggagatgaagctg
ttgttggacatgtaccgctcagcaccaaaagagcagagggataaagtacagctgatggca
gctgagaagaagacaaagtcagaggcagaagagctccgtcagagggtgcgagagctggag
gagagggaaaggagagaaggaaagaagatggcagatgaagaagctctcagaaagatccgc
tctgtggaggagcagatcgatattcttaataagaaactctctcttgccaagcaggaggaa
gatgctttgctgagtgaaatggacgtgacgggccaggcgtttgaggacatgcaggaacag
aacatccgtctgatgcagcagctcagagagaaagatgatgccaacttcaaactcatgagc
gagcgcatcaaatccaaccagatccacaaactcctcaaagaggagaaagaggagctcgct
gaccagctgctcacacttaaaacacaggtggatgctcagctacaggtggttcggaagctg
gaagagaaagagcgcctcctgcagggcaccatcagcgcagcagagagagagctggggctt
cgcacgcaggcattagagatgaacaaacgcaaggcgcaagactctgtgctgctgtcggag
gaggtgcggactcagctggaaggggtgcagcagaggttgcgttcagtcagagaagaggtg
attgagaacagcatttcacgagagaaggagtctttcaatgccagacgtgcacaggaggac
atatccaaactccgcaggaagatagagaaggccaagaaaccggcagagaacattcgaaat
ggagatgagatcctgaatgaagaaataaacgaatacaaggcccgattgacttgtccatgc
tgcaattcacgtgtaaaagatgcagttctgacaaagtgcttccacgtcttctgtttcgag
tgcgtgaagacacgttacgacacccgtcagagaaagtgcccaaagtgcaatgccgcattt
ggtgccaacgacttccaccgcatatacatcggatga
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integrated database retrieval system
