Danio rerio (zebrafish): 402935
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Entry
402935 CDS
T01004
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dre01006
]
402935 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
402935 (chm)
Prenyltransferases [BR:
dre01006
]
Protein prenylation
Rab geranylgeranyltransferase
402935 (chm)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
402935 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
402935 (chm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDI
NAD_binding_8
DAO
Motif
Other DBs
NCBI-GeneID:
402935
NCBI-ProteinID:
NP_982286
ZFIN:
ZDB-GENE-030318-2
Ensembl:
ENSDARG00000003845
UniProt:
Q6RFG0
LinkDB
All DBs
Position
21:34686796..34793908
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AA seq
666 aa
AA seq
DB search
MAAEDLPSQFDVVILGTGLTESVIAAACSRVGQSVLHLDRRNYYAGNWASFTFNGLLSWI
EEYKNQQELQITESEQEWRSLIEDGEEAVPLNSVDSSISNLEVFCYASEEEEQEEETKDL
LTCPNAETVSEETNSDSTETQDTVTSDDVTESNVKVQNEENEDSAPKEQLHASDISEHSQ
SVEEKQPNRSPADPPAELQKKITYQKLLKEGRRFNIDLVSKLMYSRGALVDLLIKSNVSR
YAEFKNIGRILTCRNGKVEQVPCSRADVFASKQLTVVEKRMLMKFLTFCLDFEQHPEEYQ
DYSEKPFSEFLKNKKLTENLQDFVLLSIAMVTQQTLTEEGLKATQHFLRCLGRYGNTPFL
FPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKESNKVKAVIDTRGQKIGCSHFVV
EDSYIREEQRESIDYRQISRAVLITDRSVLPSESDQQISLVTVPPVESSGPAVRMVELCS
SSMTCMPGTCLVHLTCSSSGTAQQDLAPVVSQLFHIPTTPGEDPSEGTGEISKPAVLWVM
YFNMRDTSAMDSSCYSLPSNVHVCTGPDAGLGSDYSIKLAESVFHCLLPDEEFCPPAPNP
EDIIYDGDAPQAEGRGFDESNDTEANKSQAEEEGTTNETNPENSEAAEMDSVAQETTLDT
NPPSEE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggaggatctcccgtctcaatttgatgttgtcattctcggaacaggcctcact
gagtctgtcattgctgcggcctgctccagagttggacaaagtgttttgcatctggacagg
aggaactattacgctggaaactgggcaagcttcacttttaatggcctgctgtcgtggatt
gaggaatataagaatcagcaggagcttcagatcacagagtcggagcaagaatggaggagc
ttgattgaagatggggaagaagcggtgcctcttaactctgtcgattcttctatttccaac
ttagaagttttctgttatgccagtgaggaagaggagcaagaagaggaaaccaaagacctg
ttaacatgtccgaatgctgaaactgtatcggaagagaccaacagtgactctacagaaact
caagacacggttacaagtgatgatgttacagaatcaaatgttaaagtgcagaatgaagag
aatgaagattctgcgccaaaagagcagctacatgcatcggatatttctgaacacagccag
tcagtggaggagaaacagcccaacagaagcccagcagatccacctgcagagctgcagaag
aagataacatatcaaaagctgttgaaagagggacgccggttcaacattgacctggtctca
aagctgatgtattcacgtggtgcactggtggatctgctcattaaatctaatgtgagccgc
tacgcagagttcaagaacatcggccgcatcctcacttgcagaaatggaaaagtggagcag
gtcccatgttcacgggcagatgtgtttgccagcaagcagctgaccgtggtggagaagcgc
atgctgatgaagtttcttaccttctgtctggactttgagcagcacccagaggagtaccag
gattactcagagaaaccgtttagtgagttcctgaagaataagaagctcactgagaacctt
caagattttgtcctgctctcaatcgctatggtgacgcaacagaccctcacggaggaagga
ctaaaggccacacagcacttcctgcgatgcctgggtcgctacggcaacactcccttcctg
ttccccctctatggccttggagaaatcccacagtgcttttgcagaatgtgtgccgtattt
ggaggaatttattgtctgcgacactcggtgcaatgtctagttgtggataaggagtccaac
aaagttaaagcagtgattgatacacgtggccagaagatcggctgcagtcattttgtggtt
gaagattcctacatcagagaggagcaaagagagagcatcgattacaggcagatatctcga
gcagtgttaatcacagacagatctgtgctgccttcagaatctgaccagcagatctctttg
gtgaccgttcctcctgtggaatcttctggaccagctgtgaggatggttgagctgtgttcg
tcctccatgacctgcatgcctggcacctgtttggtccacttgacctgttcatcgtctggt
acggcccagcaagatcttgctccagtagtatctcaattatttcacattcccaccactccg
ggagaagatccttcagaaggcacaggggagataagcaagcctgcagtgttatgggtcatg
tacttcaacatgagggacacgtcagccatggacagcagctgctacagcctaccgagcaac
gtccacgtgtgcactggtcctgatgccggactgggcagcgactactccattaaactggct
gaatcagtatttcactgtctgctccctgatgaggagttctgcccgcctgcacccaaccct
gaggacatcatctatgatggtgacgctccacaggctgaaggacgagggtttgatgagagt
aatgacacagaagcgaataaaagccaggcagaggaagaaggaaccaccaatgagacgaat
cctgagaactctgaagcagcagagatggacagtgttgcgcaggagaccacgctggacacc
aatccaccgtctgaagagtaa
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