KEGG   Danio rerio (zebrafish): 403035
Entry
403035            CDS       T01004                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    403035 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    403035 (tbpl1)
   03021 Transcription machinery [BR:dre03021]
    403035 (tbpl1)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    403035 (tbpl1)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     403035 (tbpl1)
  RNA polymerase III system
    TFIIIB
     403035 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     403035 (tbpl1)
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 403035
NCBI-ProteinID: NP_991285
ZFIN: ZDB-GENE-040520-2
Ensembl: ENSDARG00000036868
UniProt: Q5U385
LinkDB
Position
23:34539173..34547951
AA seq 186 aa
MEPSNDVALDIIVTNVVSVFRTRCHLNLRTIGLEGTNVIYKPEVGKVLMKLRKPRITASI
WSSGKIICTGATSEEEAKLGSRRLARCLQKMGFKVRFSDFKVVNVLAVCSMPFQIRLIEF
TKNNRPIASYEPELHPAASYRIKNLRSTVQVFSTGNITVTGPNVQSVASAVEEIYPLLFE
CRKTLS
NT seq 561 nt   +upstreamnt  +downstreamnt
atggaacccagtaacgatgttgcgcttgatatcatcgttactaatgtcgtatcagtattc
agaaccaggtgccatctaaacctgcgcaccatcggcctggaagggacaaatgtcatctac
aagcctgaagtgggaaaagttctgatgaagctgcggaaaccacgtatcactgcctctata
tggtcatcagggaaaattatttgcactggagcaacaagtgaggaagaagccaaactaggt
gctcgacggttggcccgctgtctacagaagatgggatttaaggtgaggttctcggatttt
aaggttgtcaatgtgctggcagtgtgctccatgccttttcagatccgtctcattgagttc
actaagaacaaccggcccattgccagctacgagcccgagcttcatcctgctgcgtcatac
agaatcaaaaacctcaggagtacagtgcaggtgttttccacaggcaatatcactgttaca
ggaccaaatgtacagagtgtggcgtctgccgtggaggagatttatcctctgctgtttgag
tgtcggaaaacactgtcataa

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